Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 9 studies | 26% ± 10% | |
glutamatergic neuron | 9 studies | 49% ± 26% | |
GABAergic neuron | 7 studies | 43% ± 23% | |
oligodendrocyte precursor cell | 7 studies | 27% ± 11% | |
astrocyte | 6 studies | 29% ± 12% | |
oligodendrocyte | 6 studies | 26% ± 8% | |
neuron | 5 studies | 24% ± 10% | |
interneuron | 5 studies | 44% ± 26% | |
microglial cell | 5 studies | 22% ± 4% | |
macrophage | 5 studies | 21% ± 2% | |
granule cell | 4 studies | 22% ± 7% | |
epithelial cell | 4 studies | 31% ± 13% | |
hepatocyte | 4 studies | 48% ± 20% | |
GABAergic interneuron | 3 studies | 25% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 848.76 | 1445 / 1445 | 100% | 6.65 | 183 / 183 |
intestine | 100% | 1005.77 | 966 / 966 | 100% | 5.51 | 527 / 527 |
liver | 100% | 1299.65 | 226 / 226 | 100% | 9.03 | 406 / 406 |
pancreas | 100% | 816.27 | 328 / 328 | 100% | 4.89 | 178 / 178 |
prostate | 100% | 891.12 | 245 / 245 | 100% | 5.20 | 502 / 502 |
stomach | 100% | 822.99 | 359 / 359 | 100% | 5.70 | 286 / 286 |
uterus | 100% | 891.66 | 170 / 170 | 100% | 5.84 | 459 / 459 |
thymus | 100% | 796.48 | 653 / 653 | 100% | 6.91 | 604 / 605 |
brain | 100% | 996.99 | 2637 / 2642 | 100% | 6.18 | 705 / 705 |
skin | 100% | 988.32 | 1809 / 1809 | 100% | 8.29 | 471 / 472 |
kidney | 100% | 1370.45 | 89 / 89 | 100% | 5.54 | 899 / 901 |
ovary | 100% | 786.32 | 180 / 180 | 100% | 4.55 | 429 / 430 |
bladder | 100% | 850.71 | 21 / 21 | 100% | 4.97 | 502 / 504 |
lung | 99% | 700.11 | 575 / 578 | 100% | 5.47 | 1155 / 1155 |
breast | 100% | 848.02 | 459 / 459 | 99% | 4.76 | 1108 / 1118 |
adrenal gland | 100% | 901.53 | 258 / 258 | 97% | 3.92 | 223 / 230 |
adipose | 100% | 867.85 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1020.47 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 6.43 | 29 / 29 |
muscle | 100% | 1010.70 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 706.79 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 5.99 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.59 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 99% | 6.17 | 79 / 80 |
peripheral blood | 98% | 728.30 | 913 / 929 | 0% | 0 | 0 / 0 |
heart | 98% | 703.53 | 841 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
Gene name | LRRC28 |
Protein name | Leucine rich repeat containing 28 Leucine-rich repeat-containing protein 28 LRRC28 protein (Leucine rich repeat containing 28) Leucine rich repeat containing 28, isoform CRA_a (cDNA FLJ59855, highly similar to Homo sapiens leucine rich repeat containing 28 (LRRC28), mRNA) |
Synonyms | UNQ436/PRO867 hCG_28260 |
Description | |
Accessions | H0YM85 ENST00000558861.1 H0YKS9 ENST00000301981.8 [Q86X40-1] Q8WUS2 ENST00000558879.5 H0YNW4 ENST00000561253.5 Q86X40 H0YKF6 ENST00000561276.5 B4DEX4 H0YKM4 ENST00000558471.5 ENST00000331450.9 ENST00000560236.1 ENST00000447360.6 [Q86X40-2] ENST00000559433.5 H0YK92 ENST00000558172.5 H0YLR7 H0YM55 |