Insufficient scRNA-seq data for expression of LRRC19 at single-cell level.
Insufficient scRNA-seq data for expression of LRRC19 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 1176.22 | 89 / 89 | 78% | 18.30 | 705 / 901 |
intestine | 92% | 1353.08 | 887 / 966 | 75% | 14.82 | 397 / 527 |
pancreas | 83% | 13.98 | 271 / 328 | 33% | 2.84 | 59 / 178 |
stomach | 57% | 4.26 | 203 / 359 | 58% | 10.67 | 167 / 286 |
bladder | 81% | 5.43 | 17 / 21 | 24% | 4.62 | 122 / 504 |
liver | 94% | 60.33 | 213 / 226 | 7% | 0.40 | 27 / 406 |
ovary | 96% | 16.56 | 173 / 180 | 1% | 0.06 | 5 / 430 |
lung | 85% | 12.57 | 490 / 578 | 7% | 0.68 | 78 / 1155 |
thymus | 87% | 11.45 | 571 / 653 | 0% | 0 | 0 / 605 |
uterus | 78% | 9.38 | 132 / 170 | 4% | 0.48 | 17 / 459 |
prostate | 75% | 7.88 | 183 / 245 | 0% | 0 | 0 / 502 |
esophagus | 55% | 4.39 | 794 / 1445 | 20% | 1.57 | 36 / 183 |
brain | 74% | 6.79 | 1953 / 2642 | 0% | 0.01 | 1 / 705 |
blood vessel | 72% | 6.74 | 962 / 1335 | 0% | 0 | 0 / 0 |
skin | 72% | 6.64 | 1301 / 1809 | 0% | 0 | 0 / 472 |
breast | 68% | 14.12 | 312 / 459 | 1% | 0.06 | 6 / 1118 |
adrenal gland | 68% | 5.28 | 175 / 258 | 0% | 0 | 0 / 230 |
adipose | 59% | 4.93 | 708 / 1204 | 0% | 0 | 0 / 0 |
spleen | 50% | 3.92 | 121 / 241 | 0% | 0 | 0 / 0 |
heart | 32% | 1.87 | 275 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 28% | 2.15 | 257 / 929 | 0% | 0 | 0 / 0 |
muscle | 12% | 0.57 | 98 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.13 | 1 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0002224 | Biological process | toll-like receptor signaling pathway |
GO_1901224 | Biological process | positive regulation of non-canonical NF-kappaB signal transduction |
GO_0048874 | Biological process | host-mediated regulation of intestinal microbiota composition |
GO_0043123 | Biological process | positive regulation of canonical NF-kappaB signal transduction |
GO_0050727 | Biological process | regulation of inflammatory response |
GO_0032637 | Biological process | interleukin-8 production |
GO_0001817 | Biological process | regulation of cytokine production |
GO_0005886 | Cellular component | plasma membrane |
GO_0038023 | Molecular function | signaling receptor activity |
Gene name | LRRC19 |
Protein name | Leucine-rich repeat-containing protein 19 |
Synonyms | |
Description | FUNCTION: Pathogen-recognition receptor which mediates the activation of TRAF2- and TRAF6 NF-kappa-B signaling pathways and induces the expression of pro-inflammatory cytokines . In kidney, prevents infection by uropathogenic bacteria by inducing the production of cytokines, chemokines and antimicrobial substances. In gut, involved in host-microbiota interactions, plays a critical role in promoting the recruitment of immune cells and intestinal inflammation (By similarity). . |
Accessions | ENST00000380055.6 Q9H756 |