Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 14 studies | 41% ± 16% | |
astrocyte | 10 studies | 33% ± 14% | |
endothelial cell of lymphatic vessel | 9 studies | 38% ± 19% | |
endothelial cell | 8 studies | 24% ± 8% | |
oligodendrocyte precursor cell | 7 studies | 23% ± 7% | |
type I pneumocyte | 7 studies | 30% ± 10% | |
epithelial cell | 6 studies | 35% ± 16% | |
endothelial cell of vascular tree | 4 studies | 20% ± 6% | |
GABAergic neuron | 4 studies | 31% ± 8% | |
vein endothelial cell | 4 studies | 44% ± 32% | |
mesothelial cell | 3 studies | 24% ± 5% | |
OFF-bipolar cell | 3 studies | 38% ± 16% | |
glutamatergic neuron | 3 studies | 31% ± 11% | |
basal cell | 3 studies | 35% ± 18% | |
interneuron | 3 studies | 35% ± 19% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 10 studies | 29% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1366.09 | 245 / 245 | 100% | 18.60 | 500 / 502 |
esophagus | 100% | 1590.07 | 1445 / 1445 | 99% | 30.26 | 182 / 183 |
intestine | 100% | 2201.06 | 966 / 966 | 99% | 23.31 | 524 / 527 |
breast | 100% | 1893.44 | 457 / 459 | 100% | 29.34 | 1114 / 1118 |
bladder | 100% | 1190.19 | 21 / 21 | 99% | 25.72 | 499 / 504 |
thymus | 100% | 2076.28 | 653 / 653 | 99% | 21.83 | 597 / 605 |
stomach | 100% | 1258.95 | 359 / 359 | 99% | 23.08 | 282 / 286 |
lung | 98% | 1071.58 | 567 / 578 | 99% | 20.63 | 1148 / 1155 |
pancreas | 98% | 690.55 | 322 / 328 | 99% | 19.55 | 176 / 178 |
uterus | 98% | 809.59 | 166 / 170 | 97% | 24.61 | 445 / 459 |
kidney | 100% | 682.52 | 89 / 89 | 89% | 9.48 | 799 / 901 |
brain | 86% | 583.41 | 2279 / 2642 | 96% | 13.73 | 674 / 705 |
ovary | 75% | 621.49 | 135 / 180 | 98% | 12.67 | 421 / 430 |
skin | 74% | 2212.38 | 1337 / 1809 | 74% | 10.29 | 348 / 472 |
tonsil | 0% | 0 | 0 / 0 | 100% | 27.73 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.55 | 1 / 1 |
blood vessel | 100% | 1218.71 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 99% | 1686.42 | 1195 / 1204 | 0% | 0 | 0 / 0 |
adrenal gland | 55% | 208.90 | 142 / 258 | 8% | 0.51 | 19 / 230 |
eye | 0% | 0 | 0 / 0 | 63% | 7.79 | 50 / 80 |
heart | 53% | 238.89 | 457 / 861 | 0% | 0 | 0 / 0 |
liver | 2% | 6.95 | 5 / 226 | 50% | 5.88 | 205 / 406 |
spleen | 20% | 72.76 | 49 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 17% | 0.90 | 5 / 29 |
peripheral blood | 10% | 55.54 | 90 / 929 | 0% | 0 | 0 / 0 |
muscle | 9% | 41.53 | 75 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005829 | Cellular component | cytosol |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
Gene name | LRRC1 |
Protein name | Leucine rich repeat containing 1 Leucine-rich repeat-containing protein 1 (LANO adapter protein) (LAP and no PDZ protein) |
Synonyms | LANO |
Description | |
Accessions | ENST00000370888.6 [Q9BTT6-1] Q9BTT6 ENST00000487251.5 [Q9BTT6-2] Q5T0G3 ENST00000370882.1 |