Insufficient scRNA-seq data for expression of LRIT3 at single-cell level.
Insufficient scRNA-seq data for expression of LRIT3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 97% | 70.89 | 447 / 459 | 16% | 0.25 | 182 / 1118 |
kidney | 100% | 70.15 | 89 / 89 | 8% | 0.21 | 69 / 901 |
brain | 97% | 82.05 | 2559 / 2642 | 11% | 0.15 | 75 / 705 |
bladder | 100% | 58.57 | 21 / 21 | 2% | 0.06 | 12 / 504 |
uterus | 99% | 58.53 | 168 / 170 | 1% | 0.02 | 6 / 459 |
intestine | 98% | 43.71 | 947 / 966 | 2% | 0.03 | 11 / 527 |
esophagus | 96% | 42.14 | 1382 / 1445 | 4% | 0.05 | 8 / 183 |
spleen | 100% | 57.83 | 240 / 241 | 0% | 0 | 0 / 0 |
thymus | 99% | 62.82 | 645 / 653 | 0% | 0.01 | 3 / 605 |
prostate | 99% | 68.74 | 243 / 245 | 0% | 0 | 0 / 502 |
lung | 97% | 49.03 | 560 / 578 | 2% | 0.03 | 23 / 1155 |
ovary | 96% | 44.02 | 173 / 180 | 1% | 0.02 | 6 / 430 |
adrenal gland | 96% | 43.05 | 248 / 258 | 1% | 0.02 | 3 / 230 |
blood vessel | 96% | 43.55 | 1284 / 1335 | 0% | 0 | 0 / 0 |
pancreas | 95% | 33.60 | 311 / 328 | 1% | 0.02 | 2 / 178 |
liver | 94% | 34.91 | 212 / 226 | 1% | 0.03 | 5 / 406 |
adipose | 94% | 38.02 | 1131 / 1204 | 0% | 0 | 0 / 0 |
stomach | 91% | 31.72 | 328 / 359 | 1% | 0.01 | 2 / 286 |
skin | 88% | 71.14 | 1590 / 1809 | 3% | 0.04 | 12 / 472 |
muscle | 84% | 29.42 | 674 / 803 | 0% | 0 | 0 / 0 |
heart | 64% | 16.18 | 554 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 24% | 5.21 | 222 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.04 | 1 / 29 |
eye | 0% | 0 | 0 / 0 | 3% | 0.10 | 2 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007601 | Biological process | visual perception |
GO_0040036 | Biological process | regulation of fibroblast growth factor receptor signaling pathway |
GO_0043204 | Cellular component | perikaryon |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0030425 | Cellular component | dendrite |
Gene name | LRIT3 |
Protein name | Leucine rich repeat, Ig-like and transmembrane domains 3 Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3 |
Synonyms | |
Description | FUNCTION: Plays a role in the synapse formation and synaptic transmission between cone photoreceptor cells and retinal bipolar cells (By similarity). Required for normal transmission of a light-evoked stimulus from the cone photoreceptor cells to the ON-bipolar cells and ON-ganglion cells in the inner retina . Required in retinal ON-bipolar cells for normal localization of the cation channel TRPM1 at dendrite tips (By similarity). Seems to play a specific role in synaptic contacts made by ON-bipolar cells with cone photoreceptor pedicles (By similarity). May also have a role in cone synapse formation (By similarity). Might facilitate FGFR1 exit from the endoplasmic reticulum to the Golgi . Could be a regulator of the FGFRs . . |
Accessions | ENST00000594814.6 [Q3SXY7-1] ENST00000327908.3 Q3SXY7 A0A0A0MR64 |