Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 6 studies | 24% ± 5% | |
endothelial cell | 5 studies | 24% ± 8% | |
Mueller cell | 5 studies | 34% ± 9% | |
adipocyte | 5 studies | 19% ± 3% | |
GABAergic neuron | 5 studies | 42% ± 18% | |
astrocyte | 5 studies | 29% ± 9% | |
glutamatergic neuron | 5 studies | 51% ± 22% | |
oligodendrocyte | 5 studies | 26% ± 7% | |
interneuron | 5 studies | 34% ± 22% | |
neuron | 4 studies | 32% ± 10% | |
retinal cone cell | 4 studies | 29% ± 3% | |
cardiac muscle cell | 4 studies | 17% ± 3% | |
oligodendrocyte precursor cell | 4 studies | 26% ± 7% | |
macrophage | 4 studies | 20% ± 5% | |
retinal ganglion cell | 3 studies | 33% ± 2% | |
fibroblast | 3 studies | 23% ± 4% | |
transit amplifying cell | 3 studies | 27% ± 9% | |
microglial cell | 3 studies | 19% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1694.69 | 1444 / 1445 | 100% | 22.23 | 183 / 183 |
breast | 100% | 2007.73 | 459 / 459 | 100% | 21.67 | 1115 / 1118 |
brain | 100% | 1849.47 | 2637 / 2642 | 100% | 25.16 | 703 / 705 |
lung | 100% | 1506.29 | 576 / 578 | 100% | 19.06 | 1153 / 1155 |
prostate | 100% | 1695.37 | 245 / 245 | 99% | 16.04 | 495 / 502 |
intestine | 100% | 1845.29 | 966 / 966 | 98% | 15.12 | 518 / 527 |
bladder | 100% | 1841.57 | 21 / 21 | 98% | 15.33 | 494 / 504 |
uterus | 100% | 2035.85 | 170 / 170 | 98% | 16.22 | 449 / 459 |
stomach | 100% | 1089.37 | 359 / 359 | 98% | 15.99 | 279 / 286 |
kidney | 100% | 896.02 | 89 / 89 | 96% | 17.24 | 865 / 901 |
thymus | 100% | 1216.08 | 653 / 653 | 96% | 10.20 | 578 / 605 |
skin | 100% | 3006.15 | 1809 / 1809 | 95% | 27.10 | 450 / 472 |
ovary | 100% | 1640.99 | 180 / 180 | 95% | 9.30 | 409 / 430 |
adrenal gland | 100% | 1266.99 | 258 / 258 | 94% | 25.73 | 217 / 230 |
pancreas | 95% | 636.04 | 310 / 328 | 99% | 13.18 | 176 / 178 |
liver | 100% | 1222.33 | 226 / 226 | 89% | 9.11 | 360 / 406 |
adipose | 100% | 2286.84 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2510.20 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2738.49 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1099.72 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.82 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 98% | 17.01 | 44 / 45 |
heart | 95% | 1090.63 | 822 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 86% | 6.58 | 25 / 29 |
peripheral blood | 83% | 1257.04 | 768 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 74% | 8.67 | 59 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007029 | Biological process | endoplasmic reticulum organization |
GO_0071786 | Biological process | endoplasmic reticulum tubular network organization |
GO_0060173 | Biological process | limb development |
GO_0042733 | Biological process | embryonic digit morphogenesis |
GO_0007596 | Biological process | blood coagulation |
GO_0032330 | Biological process | regulation of chondrocyte differentiation |
GO_0071788 | Biological process | endoplasmic reticulum tubular network maintenance |
GO_0035115 | Biological process | embryonic forelimb morphogenesis |
GO_1903373 | Biological process | positive regulation of endoplasmic reticulum tubular network organization |
GO_0071782 | Cellular component | endoplasmic reticulum tubular network |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0098826 | Cellular component | endoplasmic reticulum tubular network membrane |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0042802 | Molecular function | identical protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | LNPK |
Protein name | Endoplasmic reticulum junction formation protein lunapark (ER junction formation factor lunapark) Endoplasmic reticulum junction formation protein lunapark Lunapark, ER junction formation factor |
Synonyms | KIAA1715 LNP |
Description | FUNCTION: Endoplasmic reticulum (ER)-shaping membrane protein that plays a role in determining ER morphology . Involved in the stabilization of nascent three-way ER tubular junctions within the ER network . May also play a role as a curvature-stabilizing protein within the three-way ER tubular junction network . May be involved in limb development (By similarity). Is involved in central nervous system development . . FUNCTION: Plays a role in determining ER morphology. . |
Accessions | H7BZA1 Q9C0E8 ENST00000431754.1 ENST00000544803.5 [Q9C0E8-4] ENST00000272748.9 [Q9C0E8-1] C9JM95 C9JL94 ENST00000392540.6 ENST00000409660.5 [Q9C0E8-3] B7ZLA9 ENST00000445472.1 |