LMLN report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	11 studies	22% ± 8%	Explore
astrocyte	5 studies	29% ± 7%	Explore
glutamatergic neuron	4 studies	46% ± 9%	Explore
epithelial cell	3 studies	19% ± 3%	Explore
GABAergic neuron	3 studies	40% ± 6%	Explore
interneuron	3 studies	32% ± 13%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	31% ± 9%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	766.26	459 / 459	99%	6.85	1111 / 1118
esophagus	100%	602.56	1442 / 1445	99%	6.51	182 / 183
brain	100%	1065.45	2632 / 2642	100%	4.51	702 / 705
prostate	100%	770.81	245 / 245	99%	4.01	497 / 502
lung	99%	718.32	574 / 578	99%	5.81	1148 / 1155
pancreas	100%	678.95	327 / 328	99%	3.75	176 / 178
intestine	100%	608.56	966 / 966	98%	3.40	518 / 527
bladder	100%	607.57	21 / 21	98%	4.42	495 / 504
thymus	100%	1463.68	653 / 653	98%	3.93	593 / 605
uterus	100%	808.05	170 / 170	98%	4.84	449 / 459
kidney	100%	747.62	89 / 89	97%	5.39	876 / 901
adrenal gland	100%	783.48	257 / 258	97%	2.89	223 / 230
skin	100%	906.71	1809 / 1809	96%	5.13	455 / 472
stomach	99%	509.90	356 / 359	96%	3.38	275 / 286
ovary	100%	1042.96	180 / 180	95%	3.96	408 / 430
liver	97%	371.08	220 / 226	54%	1.34	221 / 406
adipose	100%	660.58	1204 / 1204	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	1.61	1 / 1
spleen	100%	436.11	240 / 241	0%	0	0 / 0
blood vessel	98%	439.10	1313 / 1335	0%	0	0 / 0
tonsil	0%	0	0 / 0	98%	5.27	44 / 45
muscle	97%	445.07	780 / 803	0%	0	0 / 0
heart	95%	585.96	818 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	83%	1.72	24 / 29
eye	0%	0	0 / 0	48%	0.96	38 / 80
peripheral blood	18%	48.45	166 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0