Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 3 studies | 29% ± 9% | |
glutamatergic neuron | 3 studies | 35% ± 10% | |
astrocyte | 3 studies | 21% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 23% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1415.97 | 1445 / 1445 | 100% | 28.62 | 183 / 183 |
liver | 100% | 1140.59 | 226 / 226 | 100% | 26.22 | 406 / 406 |
lung | 100% | 1301.35 | 578 / 578 | 100% | 38.63 | 1155 / 1155 |
ovary | 100% | 2239.41 | 180 / 180 | 100% | 44.86 | 430 / 430 |
prostate | 100% | 1997.07 | 245 / 245 | 100% | 43.83 | 502 / 502 |
breast | 100% | 1618.55 | 459 / 459 | 100% | 53.46 | 1117 / 1118 |
stomach | 100% | 1074.15 | 358 / 359 | 100% | 26.34 | 286 / 286 |
pancreas | 100% | 820.03 | 327 / 328 | 100% | 33.97 | 178 / 178 |
thymus | 100% | 2175.23 | 653 / 653 | 100% | 44.13 | 603 / 605 |
kidney | 100% | 1555.66 | 89 / 89 | 100% | 49.78 | 898 / 901 |
uterus | 100% | 2007.81 | 170 / 170 | 100% | 43.69 | 457 / 459 |
intestine | 100% | 1495.46 | 966 / 966 | 99% | 29.01 | 524 / 527 |
brain | 99% | 972.34 | 2626 / 2642 | 100% | 44.71 | 705 / 705 |
skin | 100% | 1416.88 | 1808 / 1809 | 99% | 34.76 | 469 / 472 |
bladder | 100% | 1707.48 | 21 / 21 | 99% | 32.74 | 498 / 504 |
adrenal gland | 100% | 1301.11 | 257 / 258 | 98% | 37.65 | 225 / 230 |
adipose | 100% | 1256.23 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 35.02 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 21.42 | 29 / 29 |
spleen | 100% | 1073.64 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 34.24 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.84 | 1 / 1 |
blood vessel | 100% | 1256.81 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1143.68 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1302.97 | 849 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 78% | 472.41 | 723 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006457 | Biological process | protein folding |
GO_0015031 | Biological process | protein transport |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005793 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0030134 | Cellular component | COPII-coated ER to Golgi transport vesicle |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005537 | Molecular function | D-mannose binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | LMAN2L |
Protein name | VIP36-like protein (Lectin mannose-binding 2-like) (LMAN2-like protein) Lectin, mannose binding 2 like |
Synonyms | UNQ368/PRO704 PSEC0028 VIPL |
Description | FUNCTION: May be involved in the regulation of export from the endoplasmic reticulum of a subset of glycoproteins. May function as a regulator of ERGIC-53. . |
Accessions | ENST00000449221.5 ENST00000434524.5 ENST00000377079.8 [Q9H0V9-2] Q9H0V9 ENST00000446780.5 F2Z2L5 ENST00000440610.5 F8WB07 F8WCX4 ENST00000434865.5 F8WEK5 ENST00000264963.9 [Q9H0V9-1] |