Insufficient scRNA-seq data for expression of LIMS3 at single-cell level.
Insufficient scRNA-seq data for expression of LIMS3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
blood vessel | 66% | 2.07 | 886 / 1335 | 0% | 0 | 0 / 0 |
adrenal gland | 50% | 1.18 | 129 / 258 | 0% | 0 | 0 / 230 |
kidney | 48% | 1.45 | 43 / 89 | 0% | 0 | 0 / 901 |
ovary | 43% | 0.89 | 78 / 180 | 0% | 0 | 0 / 430 |
thymus | 38% | 0.63 | 249 / 653 | 0% | 0 | 0 / 605 |
adipose | 38% | 0.59 | 452 / 1204 | 0% | 0 | 0 / 0 |
muscle | 35% | 0.60 | 278 / 803 | 0% | 0 | 0 / 0 |
uterus | 34% | 0.71 | 58 / 170 | 0% | 0 | 0 / 459 |
breast | 32% | 0.54 | 147 / 459 | 0% | 0 | 0 / 1118 |
lung | 32% | 0.46 | 183 / 578 | 0% | 0 | 0 / 1155 |
heart | 27% | 0.43 | 235 / 861 | 0% | 0 | 0 / 0 |
intestine | 24% | 0.35 | 236 / 966 | 0% | 0 | 0 / 527 |
esophagus | 22% | 0.30 | 322 / 1445 | 0% | 0 | 0 / 183 |
prostate | 22% | 0.31 | 54 / 245 | 0% | 0 | 0 / 502 |
skin | 21% | 0.26 | 379 / 1809 | 0% | 0 | 0 / 472 |
bladder | 19% | 0.19 | 4 / 21 | 0% | 0 | 0 / 504 |
pancreas | 19% | 0.30 | 62 / 328 | 0% | 0 | 0 / 178 |
stomach | 16% | 0.23 | 56 / 359 | 0% | 0 | 0 / 286 |
spleen | 15% | 0.18 | 35 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 11% | 0.13 | 104 / 929 | 0% | 0 | 0 / 0 |
liver | 8% | 0.11 | 18 / 226 | 0% | 0 | 0 / 406 |
brain | 6% | 0.07 | 167 / 2642 | 0% | 0 | 0 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005737 | Cellular component | cytoplasm |
GO_0005925 | Cellular component | focal adhesion |
GO_0046872 | Molecular function | metal ion binding |
Gene name | LIMS3 |
Protein name | LIM and senescent cell antigen-like-containing domain protein LIM and senescent cell antigen-like-containing domain protein 3 (Particularly interesting new Cys-His protein 3) (PINCH-3) LIM zinc finger domain containing 3 |
Synonyms | PINCH3 LIMS4 |
Description | FUNCTION: Adapter protein in a cytoplasmic complex linking beta-integrins to the actin cytoskeleton, bridges the complex to cell surface receptor tyrosine kinases and growth factor receptors. . |
Accessions | P0CW19 ENST00000480744.3 A0A0J9YYC1 ENST00000631420.1 [P0CW19-2] ENST00000487150.2 ENST00000437679.3 [P0CW19-1] A0A0J9YXC7 ENST00000632897.2 |