LCA5L report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	12 studies	25% ± 7%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	99%	102.93	456 / 459	87%	2.84	978 / 1118
thymus	100%	250.67	653 / 653	84%	1.99	508 / 605
kidney	100%	165.07	89 / 89	76%	1.83	681 / 901
ovary	100%	104.98	180 / 180	63%	1.37	273 / 430
prostate	100%	121.06	244 / 245	50%	0.75	250 / 502
adrenal gland	100%	204.57	257 / 258	44%	0.71	101 / 230
lung	98%	113.97	566 / 578	41%	0.79	469 / 1155
brain	96%	94.63	2548 / 2642	41%	0.90	291 / 705
pancreas	100%	89.53	328 / 328	33%	0.48	58 / 178
uterus	99%	130.49	168 / 170	33%	0.66	152 / 459
esophagus	96%	72.37	1387 / 1445	25%	0.38	45 / 183
bladder	100%	82.76	21 / 21	20%	0.34	99 / 504
intestine	98%	72.55	947 / 966	18%	0.26	97 / 527
stomach	97%	61.36	347 / 359	18%	0.27	51 / 286
skin	95%	63.27	1717 / 1809	14%	0.20	65 / 472
liver	94%	52.57	213 / 226	9%	0.14	35 / 406
muscle	100%	128.55	802 / 803	0%	0	0 / 0
blood vessel	99%	66.15	1315 / 1335	0%	0	0 / 0
adipose	97%	63.25	1173 / 1204	0%	0	0 / 0
spleen	96%	61.00	232 / 241	0%	0	0 / 0
heart	82%	38.74	704 / 861	0%	0	0 / 0
peripheral blood	19%	6.25	176 / 929	0%	0	0 / 0
tonsil	0%	0	0 / 0	9%	0.13	4 / 45
eye	0%	0	0 / 0	5%	0.06	4 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1