Insufficient scRNA-seq data for expression of LBX2 at single-cell level.
Insufficient scRNA-seq data for expression of LBX2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 300.77 | 226 / 226 | 92% | 5.81 | 373 / 406 |
skin | 91% | 26.23 | 1640 / 1809 | 90% | 5.22 | 424 / 472 |
pancreas | 96% | 24.21 | 314 / 328 | 84% | 2.35 | 149 / 178 |
breast | 100% | 48.54 | 458 / 459 | 74% | 2.00 | 832 / 1118 |
bladder | 95% | 26.71 | 20 / 21 | 76% | 2.18 | 384 / 504 |
intestine | 97% | 38.41 | 940 / 966 | 74% | 1.78 | 388 / 527 |
stomach | 96% | 39.11 | 344 / 359 | 74% | 1.94 | 213 / 286 |
lung | 98% | 35.50 | 567 / 578 | 70% | 1.90 | 810 / 1155 |
uterus | 89% | 17.64 | 152 / 170 | 78% | 3.38 | 359 / 459 |
kidney | 100% | 57.89 | 89 / 89 | 66% | 2.40 | 594 / 901 |
esophagus | 85% | 14.84 | 1222 / 1445 | 74% | 2.05 | 135 / 183 |
thymus | 99% | 38.14 | 645 / 653 | 43% | 0.76 | 261 / 605 |
ovary | 71% | 9.84 | 128 / 180 | 31% | 1.05 | 134 / 430 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.19 | 1 / 1 |
spleen | 100% | 40.62 | 240 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 44.70 | 1199 / 1204 | 0% | 0 | 0 / 0 |
prostate | 86% | 15.72 | 210 / 245 | 6% | 0.11 | 29 / 502 |
lymph node | 0% | 0 | 0 / 0 | 90% | 2.43 | 26 / 29 |
adrenal gland | 75% | 10.88 | 193 / 258 | 13% | 0.37 | 30 / 230 |
heart | 83% | 14.72 | 711 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 79% | 18.62 | 734 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 73% | 11.96 | 975 / 1335 | 0% | 0 | 0 / 0 |
brain | 54% | 7.54 | 1421 / 2642 | 14% | 0.40 | 101 / 705 |
muscle | 58% | 6.99 | 462 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 49% | 0.95 | 22 / 45 |
eye | 0% | 0 | 0 / 0 | 4% | 0.08 | 3 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_2000052 | Biological process | positive regulation of non-canonical Wnt signaling pathway |
GO_1904105 | Biological process | positive regulation of convergent extension involved in gastrulation |
GO_0042692 | Biological process | muscle cell differentiation |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | LBX2 |
Protein name | Transcription factor LBX2 (Ladybird homeobox 2) (Ladybird homeobox protein homolog 2) HCG1641699, isoform CRA_b (Ladybird homeobox 2) |
Synonyms | LP3727 hCG_1641699 |
Description | FUNCTION: Transcription factor. . |
Accessions | ENST00000377566.9 [Q6XYB7-1] G3V218 Q6XYB7 ENST00000341396.2 ENST00000460508.3 [Q6XYB7-2] |