Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 15 studies | 65% ± 13% | |
glutamatergic neuron | 12 studies | 59% ± 20% | |
GABAergic neuron | 10 studies | 53% ± 22% | |
astrocyte | 7 studies | 37% ± 17% | |
interneuron | 6 studies | 68% ± 9% | |
neuron | 5 studies | 40% ± 11% | |
oligodendrocyte precursor cell | 5 studies | 27% ± 9% | |
endothelial cell | 4 studies | 44% ± 16% | |
granule cell | 4 studies | 61% ± 20% | |
GABAergic interneuron | 3 studies | 51% ± 7% | |
glial cell | 3 studies | 54% ± 2% | |
microglial cell | 3 studies | 35% ± 5% | |
GABAergic amacrine cell | 3 studies | 41% ± 9% | |
glycinergic amacrine cell | 3 studies | 39% ± 14% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 16 studies | 49% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2394.44 | 2639 / 2642 | 92% | 8.08 | 650 / 705 |
spleen | 89% | 439.16 | 215 / 241 | 0% | 0 | 0 / 0 |
intestine | 60% | 388.17 | 578 / 966 | 3% | 0.07 | 18 / 527 |
adrenal gland | 9% | 37.93 | 23 / 258 | 51% | 5.12 | 118 / 230 |
esophagus | 47% | 220.23 | 679 / 1445 | 7% | 0.47 | 12 / 183 |
ovary | 17% | 38.51 | 30 / 180 | 18% | 0.89 | 79 / 430 |
heart | 33% | 123.65 | 281 / 861 | 0% | 0 | 0 / 0 |
skin | 11% | 37.82 | 197 / 1809 | 21% | 1.17 | 99 / 472 |
pancreas | 0% | 0 | 0 / 328 | 27% | 0.50 | 48 / 178 |
bladder | 19% | 77.67 | 4 / 21 | 4% | 0.16 | 20 / 504 |
stomach | 16% | 51.14 | 57 / 359 | 4% | 0.08 | 12 / 286 |
uterus | 3% | 8.21 | 5 / 170 | 10% | 0.41 | 45 / 459 |
eye | 0% | 0 | 0 / 0 | 11% | 0.25 | 9 / 80 |
lung | 0% | 0.93 | 2 / 578 | 9% | 0.38 | 106 / 1155 |
breast | 1% | 2.81 | 6 / 459 | 8% | 0.36 | 90 / 1118 |
kidney | 1% | 2.03 | 1 / 89 | 6% | 0.38 | 50 / 901 |
prostate | 6% | 17.18 | 15 / 245 | 0% | 0.01 | 2 / 502 |
liver | 0% | 0.97 | 1 / 226 | 4% | 0.12 | 17 / 406 |
tonsil | 0% | 0 | 0 / 0 | 4% | 0.37 | 2 / 45 |
thymus | 0% | 0.31 | 1 / 653 | 2% | 0.37 | 15 / 605 |
adipose | 2% | 5.58 | 25 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 1% | 2.06 | 12 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.18 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0021766 | Biological process | hippocampus development |
GO_0030097 | Biological process | hemopoiesis |
GO_0002121 | Biological process | inter-male aggressive behavior |
GO_0001764 | Biological process | neuron migration |
GO_0048812 | Biological process | neuron projection morphogenesis |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0021740 | Biological process | principal sensory nucleus of trigeminal nerve development |
GO_0007416 | Biological process | synapse assembly |
GO_0098609 | Biological process | cell-cell adhesion |
GO_0072102 | Biological process | glomerulus morphogenesis |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0043198 | Cellular component | dendritic shaft |
GO_0030425 | Cellular component | dendrite |
GO_0005911 | Cellular component | cell-cell junction |
GO_0008021 | Cellular component | synaptic vesicle |
GO_0030424 | Cellular component | axon |
GO_0050839 | Molecular function | cell adhesion molecule binding |
GO_0005515 | Molecular function | protein binding |
Gene name | KIRREL3 |
Protein name | Kin of IRRE-like protein 3 (Kin of irregular chiasm-like protein 3) (Nephrin-like protein 2) [Cleaved into: Processed kin of IRRE-like protein 3] Kirre like nephrin family adhesion molecule 3 |
Synonyms | UNQ5923/PRO4502/PRO19814 NEPH2 KIAA1867 |
Description | FUNCTION: Synaptic adhesion molecule required for the formation of target-specific synapses. Required for formation of target-specific synapses at hippocampal mossy fiber synapses. Required for formation of mossy fiber filopodia, the synaptic structures connecting dentate granule and GABA neurons. Probably acts as a homophilic adhesion molecule that promotes trans-cellular interactions and stabilize mossy fiber filipodia contact and subsequent synapse formation. Required for the coalescence of vomeronasal sensory neuron axons. May be involved in the hematopoietic supportive capacity of stroma cells; the secreted extracellular domain is directly responsible for supporting hematopoietic stem cells. . |
Accessions | ENST00000525144.7 [Q8IZU9-1] ENST00000529097.6 Q8IZU9 E9PRX9 ENST00000525704.2 [Q8IZU9-2] |