Name | Number of supported studies | Average coverage | |
---|---|---|---|
pericyte | 9 studies | 28% ± 11% | |
fibroblast | 8 studies | 26% ± 6% | |
adipocyte | 7 studies | 25% ± 5% | |
smooth muscle cell | 6 studies | 27% ± 7% | |
GABAergic neuron | 5 studies | 28% ± 7% | |
endothelial cell | 4 studies | 32% ± 8% | |
interneuron | 4 studies | 27% ± 8% | |
podocyte | 3 studies | 56% ± 13% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
adipose | 3 studies | 21% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 7019.49 | 180 / 180 | 99% | 44.26 | 426 / 430 |
skin | 96% | 7418.58 | 1728 / 1809 | 100% | 99.37 | 472 / 472 |
breast | 100% | 6005.08 | 459 / 459 | 91% | 24.71 | 1021 / 1118 |
lung | 100% | 5457.71 | 577 / 578 | 91% | 23.97 | 1051 / 1155 |
thymus | 100% | 3655.45 | 650 / 653 | 90% | 17.46 | 542 / 605 |
kidney | 100% | 4418.12 | 89 / 89 | 89% | 35.81 | 802 / 901 |
esophagus | 97% | 3493.65 | 1397 / 1445 | 91% | 30.29 | 166 / 183 |
intestine | 97% | 4044.63 | 937 / 966 | 81% | 15.55 | 429 / 527 |
uterus | 100% | 6251.22 | 170 / 170 | 75% | 22.20 | 345 / 459 |
prostate | 99% | 3441.20 | 242 / 245 | 67% | 8.85 | 335 / 502 |
bladder | 100% | 4534.86 | 21 / 21 | 65% | 13.15 | 327 / 504 |
adrenal gland | 100% | 4180.84 | 258 / 258 | 61% | 9.94 | 141 / 230 |
stomach | 67% | 1903.79 | 240 / 359 | 89% | 19.89 | 254 / 286 |
pancreas | 34% | 463.37 | 110 / 328 | 91% | 27.60 | 162 / 178 |
adipose | 100% | 7321.70 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 9427.30 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 30.84 | 79 / 80 |
spleen | 95% | 2270.20 | 229 / 241 | 0% | 0 | 0 / 0 |
heart | 90% | 1905.11 | 772 / 861 | 0% | 0 | 0 / 0 |
brain | 8% | 92.76 | 206 / 2642 | 76% | 12.72 | 534 / 705 |
tonsil | 0% | 0 | 0 / 0 | 71% | 16.07 | 32 / 45 |
lymph node | 0% | 0 | 0 / 0 | 34% | 3.63 | 10 / 29 |
liver | 6% | 85.03 | 13 / 226 | 25% | 4.12 | 101 / 406 |
muscle | 22% | 292.93 | 176 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0001933 | Biological process | negative regulation of protein phosphorylation |
GO_0030838 | Biological process | positive regulation of actin filament polymerization |
GO_0098609 | Biological process | cell-cell adhesion |
GO_0003094 | Biological process | glomerular filtration |
GO_0097017 | Biological process | renal protein absorption |
GO_0045217 | Biological process | cell-cell junction maintenance |
GO_0005911 | Cellular component | cell-cell junction |
GO_0045121 | Cellular component | membrane raft |
GO_0005886 | Cellular component | plasma membrane |
GO_0031253 | Cellular component | cell projection membrane |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0043198 | Cellular component | dendritic shaft |
GO_0050839 | Molecular function | cell adhesion molecule binding |
GO_0017022 | Molecular function | myosin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | KIRREL1 |
Protein name | Kin of IRRE-like protein 1 (Kin of irregular chiasm-like protein 1) (Nephrin-like protein 1) Kirre like nephrin family adhesion molecule 1 (cDNA FLJ56360, highly similar to Kin of IRRE-like protein 1) Kirre like nephrin family adhesion molecule 1 |
Synonyms | KIRREL NEPH1 |
Description | FUNCTION: Required for proper function of the glomerular filtration barrier. It is involved in the maintenance of a stable podocyte architecture with interdigitating foot processes connected by specialized cell-cell junctions, known as the slit diaphragm . It is a signaling protein that needs the presence of TEC kinases to fully trans-activate the transcription factor AP-1 (By similarity). . |
Accessions | B4DN67 ENST00000368173.7 ENST00000360089.8 ENST00000368172.2 ENST00000359209.11 [Q96J84-1] Q96J84 Q5W0F9 Q5W0G0 |