Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 12 studies | 40% ± 17% | |
glutamatergic neuron | 9 studies | 62% ± 19% | |
GABAergic neuron | 8 studies | 52% ± 25% | |
neuron | 8 studies | 52% ± 16% | |
amacrine cell | 8 studies | 45% ± 13% | |
oligodendrocyte precursor cell | 7 studies | 45% ± 10% | |
retinal ganglion cell | 7 studies | 72% ± 16% | |
retina horizontal cell | 6 studies | 35% ± 12% | |
retinal bipolar neuron | 5 studies | 40% ± 6% | |
astrocyte | 5 studies | 27% ± 13% | |
interneuron | 5 studies | 76% ± 15% | |
endothelial cell | 4 studies | 41% ± 25% | |
granule cell | 4 studies | 71% ± 7% | |
OFF-bipolar cell | 4 studies | 40% ± 18% | |
ON-bipolar cell | 4 studies | 42% ± 16% | |
pancreatic A cell | 3 studies | 38% ± 17% | |
type B pancreatic cell | 3 studies | 47% ± 24% | |
GABAergic amacrine cell | 3 studies | 59% ± 3% | |
glycinergic amacrine cell | 3 studies | 28% ± 3% | |
rod bipolar cell | 3 studies | 53% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 40834.35 | 2638 / 2642 | 99% | 27.32 | 699 / 705 |
prostate | 58% | 3434.82 | 142 / 245 | 100% | 18.85 | 501 / 502 |
adrenal gland | 40% | 1926.49 | 104 / 258 | 80% | 14.62 | 185 / 230 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.75 | 1 / 1 |
breast | 1% | 41.00 | 5 / 459 | 44% | 3.14 | 490 / 1118 |
ovary | 3% | 166.88 | 6 / 180 | 30% | 1.29 | 131 / 430 |
bladder | 0% | 0 | 0 / 21 | 16% | 0.78 | 81 / 504 |
pancreas | 0% | 0 | 0 / 328 | 14% | 0.95 | 25 / 178 |
uterus | 1% | 83.99 | 2 / 170 | 12% | 0.59 | 53 / 459 |
skin | 0% | 8.77 | 3 / 1809 | 11% | 0.64 | 50 / 472 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.16 | 2 / 29 |
thymus | 0% | 0 | 0 / 653 | 7% | 0.35 | 41 / 605 |
intestine | 1% | 30.89 | 7 / 966 | 3% | 0.11 | 14 / 527 |
lung | 0% | 0 | 0 / 578 | 3% | 0.18 | 38 / 1155 |
kidney | 0% | 0 | 0 / 89 | 3% | 0.09 | 29 / 901 |
eye | 0% | 0 | 0 / 0 | 3% | 0.16 | 2 / 80 |
liver | 0% | 0 | 0 / 226 | 1% | 0.09 | 6 / 406 |
stomach | 0% | 0 | 0 / 359 | 1% | 0.12 | 4 / 286 |
esophagus | 0% | 10.60 | 4 / 1445 | 1% | 0.09 | 2 / 183 |
heart | 0% | 3.64 | 1 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 2.29 | 1 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adipose | 0% | 0 | 0 / 1204 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
GO_0051028 | Biological process | mRNA transport |
GO_0098964 | Biological process | anterograde dendritic transport of messenger ribonucleoprotein complex |
GO_0006996 | Biological process | organelle organization |
GO_0008298 | Biological process | intracellular mRNA localization |
GO_0008045 | Biological process | motor neuron axon guidance |
GO_0098971 | Biological process | anterograde dendritic transport of neurotransmitter receptor complex |
GO_0007411 | Biological process | axon guidance |
GO_0099641 | Biological process | anterograde axonal protein transport |
GO_0048489 | Biological process | synaptic vesicle transport |
GO_0005874 | Cellular component | microtubule |
GO_0150034 | Cellular component | distal axon |
GO_0005871 | Cellular component | kinesin complex |
GO_0043025 | Cellular component | neuronal cell body |
GO_0035253 | Cellular component | ciliary rootlet |
GO_0099524 | Cellular component | postsynaptic cytosol |
GO_0044295 | Cellular component | axonal growth cone |
GO_0032839 | Cellular component | dendrite cytoplasm |
GO_1904115 | Cellular component | axon cytoplasm |
GO_0008574 | Molecular function | plus-end-directed microtubule motor activity |
GO_0034190 | Molecular function | apolipoprotein receptor binding |
GO_0003777 | Molecular function | microtubule motor activity |
GO_0008017 | Molecular function | microtubule binding |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
Gene name | KIF5C |
Protein name | Kinesin family member 5C Uncharacterized protein KIF5C Kinesin-like protein Kinesin heavy chain isoform 5C (EC 3.6.4.-) (Kinesin heavy chain neuron-specific 2) (Kinesin-1) |
Synonyms | KIAA0531 NKHC2 |
Description | FUNCTION: Microtubule-associated force-producing protein that may play a role in organelle transport. Has ATPase activity (By similarity). Involved in synaptic transmission . Mediates dendritic trafficking of mRNAs (By similarity). Required for anterograde axonal transportation of MAPK8IP3/JIP3 which is essential for MAPK8IP3/JIP3 function in axon elongation (By similarity). . |
Accessions | Q6PJC4 ENST00000679129.1 [O60282-2] O60282 A1L179 A0A7I2V3V4 ENST00000677747.1 ENST00000677443.1 ENST00000678160.1 ENST00000678636.1 ENST00000678856.1 Q57YV6 ENST00000616530.4 Q57Z91 A0A7I2YQQ7 ENST00000677891.1 [O60282-1] A0A0G2JMZ6 A0A7I2YQB4 A0A7I2V581 Q53QT4 ENST00000677843.1 A0A7I2V3N5 ENST00000678056.1 A0A7I2V4K6 ENST00000435030.6 [O60282-1] ENST00000677080.1 Q57YV5 Q6PKD1 ENST00000678720.1 A0A7I2V492 ENST00000677280.1 A0A7I2V352 ENST00000676677.1 [O60282-2] |