KHNYN report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
epithelial cell	3 studies	23% ± 6%	Explore
basal cell	3 studies	25% ± 10%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	5905.57	1445 / 1445	100%	27.85	183 / 183
intestine	100%	6909.10	966 / 966	100%	26.59	527 / 527
stomach	100%	5685.03	359 / 359	100%	24.21	286 / 286
lung	100%	5784.66	578 / 578	100%	24.36	1150 / 1155
breast	100%	6031.78	459 / 459	99%	28.36	1111 / 1118
bladder	100%	6274.52	21 / 21	99%	21.67	500 / 504
ovary	100%	9088.62	180 / 180	99%	16.62	425 / 430
skin	100%	5457.89	1809 / 1809	99%	20.32	466 / 472
prostate	100%	6224.72	245 / 245	98%	21.51	494 / 502
thymus	100%	5720.62	653 / 653	98%	19.64	595 / 605
pancreas	100%	3967.85	328 / 328	98%	23.13	175 / 178
uterus	100%	7003.87	170 / 170	98%	18.99	449 / 459
kidney	100%	3510.20	89 / 89	96%	16.17	861 / 901
adrenal gland	100%	4796.86	258 / 258	86%	10.62	197 / 230
liver	100%	2404.54	226 / 226	82%	9.21	331 / 406
brain	94%	2208.09	2495 / 2642	59%	5.91	413 / 705
adipose	100%	5634.07	1204 / 1204	0%	0	0 / 0
blood vessel	100%	4907.03	1335 / 1335	0%	0	0 / 0
spleen	100%	7254.19	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	24.76	45 / 45
ureter	0%	0	0 / 0	100%	4.34	1 / 1
muscle	100%	3041.82	801 / 803	0%	0	0 / 0
peripheral blood	99%	4875.50	924 / 929	0%	0	0 / 0
heart	99%	2545.42	853 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	98%	15.01	78 / 80
lymph node	0%	0	0 / 0	97%	19.60	28 / 29
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0