Insufficient scRNA-seq data for expression of KDM4E at single-cell level.
Insufficient scRNA-seq data for expression of KDM4E at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
spleen | 98% | 18.35 | 237 / 241 | 0% | 0 | 0 / 0 |
thymus | 96% | 18.19 | 625 / 653 | 2% | 0.03 | 14 / 605 |
prostate | 92% | 15.34 | 226 / 245 | 1% | 0.02 | 6 / 502 |
breast | 88% | 11.48 | 402 / 459 | 1% | 0.01 | 8 / 1118 |
uterus | 85% | 8.91 | 145 / 170 | 1% | 0.02 | 3 / 459 |
ovary | 84% | 11.81 | 152 / 180 | 0% | 0.01 | 2 / 430 |
skin | 78% | 9.93 | 1420 / 1809 | 1% | 0.02 | 5 / 472 |
kidney | 79% | 8.26 | 70 / 89 | 0% | 0.00 | 1 / 901 |
esophagus | 69% | 5.79 | 1001 / 1445 | 0% | 0 | 0 / 183 |
bladder | 67% | 10.38 | 14 / 21 | 1% | 0.01 | 3 / 504 |
adipose | 66% | 5.46 | 791 / 1204 | 0% | 0 | 0 / 0 |
pancreas | 61% | 4.68 | 199 / 328 | 0% | 0 | 0 / 178 |
adrenal gland | 60% | 4.29 | 154 / 258 | 0% | 0.01 | 1 / 230 |
heart | 59% | 4.14 | 508 / 861 | 0% | 0 | 0 / 0 |
intestine | 54% | 3.76 | 520 / 966 | 0% | 0.01 | 1 / 527 |
lung | 48% | 3.26 | 278 / 578 | 1% | 0.03 | 14 / 1155 |
stomach | 43% | 2.70 | 154 / 359 | 0% | 0 | 0 / 286 |
brain | 41% | 2.65 | 1076 / 2642 | 0% | 0 | 0 / 705 |
blood vessel | 31% | 2.02 | 417 / 1335 | 0% | 0 | 0 / 0 |
muscle | 22% | 2.04 | 173 / 803 | 0% | 0 | 0 / 0 |
liver | 15% | 0.71 | 33 / 226 | 0% | 0 | 0 / 406 |
peripheral blood | 11% | 0.66 | 104 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010468 | Biological process | regulation of gene expression |
GO_0006338 | Biological process | chromatin remodeling |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0140684 | Molecular function | histone H3K9me2/H3K9me3 demethylase activity |
GO_0032454 | Molecular function | histone H3K9 demethylase activity |
GO_0046872 | Molecular function | metal ion binding |
Gene name | KDM4E |
Protein name | Lysine-specific demethylase 4E (EC 1.14.11.66) (KDM4D-like protein) (Lysine-specific demethylase 4D-like) ([histone H3]-trimethyl-L-lysine(9) demethylase 4E) |
Synonyms | KDM4DL |
Description | FUNCTION: Histone demethylase that specifically demethylates 'Lys-9' of histone H3, thereby playing a central role in histone code. . |
Accessions | B2RXH2 ENST00000450979.2 |