Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 5 studies | 22% ± 6% | |
GABAergic neuron | 3 studies | 30% ± 5% | |
glutamatergic neuron | 3 studies | 33% ± 7% | |
oligodendrocyte precursor cell | 3 studies | 19% ± 3% | |
oligodendrocyte | 3 studies | 24% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 29% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 3053.89 | 2642 / 2642 | 100% | 22.12 | 705 / 705 |
prostate | 100% | 1597.76 | 245 / 245 | 100% | 11.69 | 501 / 502 |
adrenal gland | 100% | 1238.42 | 258 / 258 | 100% | 17.70 | 229 / 230 |
ovary | 100% | 1655.37 | 180 / 180 | 100% | 11.13 | 428 / 430 |
skin | 100% | 1272.94 | 1808 / 1809 | 100% | 14.06 | 470 / 472 |
esophagus | 100% | 1070.79 | 1445 / 1445 | 99% | 11.84 | 182 / 183 |
intestine | 100% | 1308.78 | 966 / 966 | 99% | 11.23 | 524 / 527 |
breast | 100% | 1287.14 | 459 / 459 | 99% | 14.68 | 1110 / 1118 |
bladder | 100% | 1339.62 | 21 / 21 | 99% | 11.40 | 500 / 504 |
thymus | 100% | 1221.33 | 653 / 653 | 99% | 9.55 | 600 / 605 |
uterus | 100% | 1664.82 | 170 / 170 | 99% | 11.35 | 455 / 459 |
stomach | 100% | 787.67 | 358 / 359 | 99% | 10.74 | 284 / 286 |
lung | 99% | 1029.11 | 574 / 578 | 99% | 11.24 | 1144 / 1155 |
kidney | 100% | 1055.10 | 89 / 89 | 97% | 8.83 | 876 / 901 |
pancreas | 98% | 626.13 | 320 / 328 | 99% | 12.31 | 176 / 178 |
liver | 95% | 558.61 | 214 / 226 | 76% | 4.79 | 308 / 406 |
eye | 0% | 0 | 0 / 0 | 100% | 11.53 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 9.67 | 29 / 29 |
spleen | 100% | 1649.65 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 9.57 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.31 | 1 / 1 |
adipose | 100% | 1126.74 | 1202 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1192.43 | 1332 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 976.54 | 888 / 929 | 0% | 0 | 0 / 0 |
heart | 89% | 513.97 | 768 / 861 | 0% | 0 | 0 / 0 |
muscle | 56% | 250.63 | 451 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0035024 | Biological process | negative regulation of Rho protein signal transduction |
GO_0043149 | Biological process | stress fiber assembly |
GO_0051260 | Biological process | protein homooligomerization |
GO_0016567 | Biological process | protein ubiquitination |
GO_0050806 | Biological process | positive regulation of synaptic transmission |
GO_0061351 | Biological process | neural precursor cell proliferation |
GO_0043161 | Biological process | proteasome-mediated ubiquitin-dependent protein catabolic process |
GO_0016477 | Biological process | cell migration |
GO_0016604 | Cellular component | nuclear body |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0031463 | Cellular component | Cul3-RING ubiquitin ligase complex |
GO_0004842 | Molecular function | ubiquitin-protein transferase activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0031267 | Molecular function | small GTPase binding |
Gene name | KCTD13 |
Protein name | Potassium channel tetramerization domain containing 13 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1 (hBACURD1) (BTB/POZ domain-containing protein KCTD13) (Polymerase delta-interacting protein 1) (TNFAIP1-like protein) |
Synonyms | PDIP1 BACURD1 PP6832 FKSG86 POLDIP1 |
Description | FUNCTION: Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex required for synaptic transmission . The BCR(KCTD13) E3 ubiquitin ligase complex mediates the ubiquitination of RHOA, leading to its degradation by the proteasome Degradation of RHOA regulates the actin cytoskeleton and promotes synaptic transmission (By similarity). . |
Accessions | ENST00000567795.3 I3L108 ENST00000566413.1 ENST00000568995.1 ENST00000648037.1 A0A3B3IS35 Q8WZ19 ENST00000649581.1 ENST00000561540.2 ENST00000568000.6 ENST00000308768.9 ENST00000566842.5 A0A3B3IS45 H3BM90 I3L3K4 I3L1U2 |