Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 10 studies | 44% ± 23% | |
glutamatergic neuron | 10 studies | 56% ± 24% | |
oligodendrocyte precursor cell | 10 studies | 40% ± 14% | |
astrocyte | 7 studies | 36% ± 11% | |
interneuron | 6 studies | 48% ± 30% | |
retinal ganglion cell | 5 studies | 27% ± 8% | |
cardiac muscle cell | 5 studies | 38% ± 12% | |
neuron | 4 studies | 23% ± 7% | |
granule cell | 4 studies | 57% ± 2% | |
retinal bipolar neuron | 4 studies | 23% ± 7% | |
endothelial cell | 3 studies | 42% ± 14% | |
GABAergic interneuron | 3 studies | 40% ± 10% | |
OFF-bipolar cell | 3 studies | 27% ± 8% | |
ON-bipolar cell | 3 studies | 18% ± 2% | |
glycinergic amacrine cell | 3 studies | 21% ± 5% | |
rod bipolar cell | 3 studies | 30% ± 8% | |
hepatocyte | 3 studies | 48% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 2529.88 | 245 / 245 | 99% | 28.85 | 499 / 502 |
brain | 98% | 4826.99 | 2589 / 2642 | 98% | 25.13 | 692 / 705 |
liver | 100% | 1548.66 | 226 / 226 | 44% | 4.18 | 179 / 406 |
pancreas | 79% | 895.73 | 260 / 328 | 63% | 5.00 | 112 / 178 |
breast | 77% | 623.66 | 354 / 459 | 63% | 11.23 | 701 / 1118 |
esophagus | 80% | 2399.11 | 1156 / 1445 | 60% | 7.27 | 109 / 183 |
uterus | 94% | 1676.35 | 159 / 170 | 42% | 3.99 | 195 / 459 |
bladder | 100% | 2098.29 | 21 / 21 | 22% | 1.83 | 113 / 504 |
intestine | 79% | 1457.45 | 766 / 966 | 34% | 2.81 | 177 / 527 |
stomach | 59% | 969.45 | 213 / 359 | 45% | 4.96 | 129 / 286 |
lung | 63% | 551.90 | 365 / 578 | 38% | 3.02 | 440 / 1155 |
blood vessel | 96% | 1688.60 | 1282 / 1335 | 0% | 0 | 0 / 0 |
adipose | 94% | 1085.34 | 1128 / 1204 | 0% | 0 | 0 / 0 |
spleen | 93% | 1146.90 | 225 / 241 | 0% | 0 | 0 / 0 |
heart | 92% | 1999.18 | 790 / 861 | 0% | 0 | 0 / 0 |
adrenal gland | 50% | 367.98 | 128 / 258 | 34% | 7.10 | 79 / 230 |
skin | 75% | 1062.21 | 1361 / 1809 | 5% | 0.53 | 25 / 472 |
kidney | 45% | 301.30 | 40 / 89 | 27% | 2.34 | 243 / 901 |
eye | 0% | 0 | 0 / 0 | 68% | 8.96 | 54 / 80 |
thymus | 44% | 326.09 | 289 / 653 | 4% | 0.24 | 22 / 605 |
tonsil | 0% | 0 | 0 / 0 | 47% | 3.67 | 21 / 45 |
muscle | 45% | 334.97 | 365 / 803 | 0% | 0 | 0 / 0 |
ovary | 10% | 119.11 | 18 / 180 | 22% | 1.69 | 95 / 430 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0051260 | Biological process | protein homooligomerization |
GO_0006813 | Biological process | potassium ion transport |
GO_0098915 | Biological process | membrane repolarization during ventricular cardiac muscle cell action potential |
GO_0086013 | Biological process | membrane repolarization during cardiac muscle cell action potential |
GO_0099625 | Biological process | ventricular cardiac muscle cell membrane repolarization |
GO_0097623 | Biological process | potassium ion export across plasma membrane |
GO_0086091 | Biological process | regulation of heart rate by cardiac conduction |
GO_0001508 | Biological process | action potential |
GO_0086009 | Biological process | membrane repolarization |
GO_0005886 | Cellular component | plasma membrane |
GO_0043197 | Cellular component | dendritic spine |
GO_0042383 | Cellular component | sarcolemma |
GO_0043025 | Cellular component | neuronal cell body |
GO_0098982 | Cellular component | GABA-ergic synapse |
GO_0045211 | Cellular component | postsynaptic membrane |
GO_0099634 | Cellular component | postsynaptic specialization membrane |
GO_0008076 | Cellular component | voltage-gated potassium channel complex |
GO_0005250 | Molecular function | A-type (transient outward) potassium channel activity |
GO_0005249 | Molecular function | voltage-gated potassium channel activity |
GO_1902282 | Molecular function | voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization |
GO_0086008 | Molecular function | voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization |
GO_0046872 | Molecular function | metal ion binding |
GO_0044325 | Molecular function | transmembrane transporter binding |
GO_0005515 | Molecular function | protein binding |
Gene name | KCND3 |
Protein name | Potassium voltage-gated channel subfamily D member 3 (Voltage-gated potassium channel subunit Kv4.3) Potassium voltage-gated channel, Shal-related subfamily, member 3 Potassium voltage-gated channel long splice variant 1 |
Synonyms | |
Description | FUNCTION: Pore-forming (alpha) subunit of voltage-gated rapidly inactivating A-type potassium channels. May contribute to I(To) current in heart and I(Sa) current in neurons. Channel properties are modulated by interactions with other alpha subunits and with regulatory subunits. . |
Accessions | ENST00000302127.5 [Q9UK17-1] B7ZKV0 A6QL42 ENST00000369697.5 [Q9UK17-2] Q9UK17 ENST00000315987.6 [Q9UK17-1] |