Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| astrocyte | 10 studies | 38% ± 19% | |
| ciliated cell | 5 studies | 28% ± 8% | |
| adipocyte | 4 studies | 26% ± 9% | |
| oligodendrocyte | 4 studies | 25% ± 7% | |
| epithelial cell | 3 studies | 26% ± 12% | |
| GABAergic neuron | 3 studies | 47% ± 9% | |
| glutamatergic neuron | 3 studies | 50% ± 10% | |
| ependymal cell | 3 studies | 40% ± 14% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 5 studies | 34% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 537.79 | 2642 / 2642 | 98% | 4.11 | 693 / 705 |
| ovary | 100% | 271.35 | 180 / 180 | 96% | 4.34 | 412 / 430 |
| breast | 100% | 343.80 | 458 / 459 | 94% | 3.56 | 1049 / 1118 |
| thymus | 100% | 1456.57 | 653 / 653 | 92% | 5.93 | 555 / 605 |
| kidney | 100% | 551.57 | 89 / 89 | 91% | 4.83 | 823 / 901 |
| prostate | 100% | 380.98 | 245 / 245 | 91% | 2.28 | 455 / 502 |
| adrenal gland | 100% | 266.90 | 257 / 258 | 83% | 2.82 | 191 / 230 |
| uterus | 99% | 228.36 | 168 / 170 | 73% | 2.70 | 335 / 459 |
| lung | 97% | 274.03 | 562 / 578 | 70% | 1.85 | 804 / 1155 |
| skin | 98% | 255.48 | 1770 / 1809 | 67% | 2.19 | 317 / 472 |
| esophagus | 98% | 212.17 | 1423 / 1445 | 63% | 1.77 | 115 / 183 |
| liver | 96% | 259.39 | 216 / 226 | 60% | 1.48 | 244 / 406 |
| pancreas | 95% | 138.87 | 312 / 328 | 56% | 1.05 | 100 / 178 |
| bladder | 100% | 205.62 | 21 / 21 | 46% | 1.25 | 234 / 504 |
| stomach | 95% | 152.96 | 340 / 359 | 36% | 0.86 | 103 / 286 |
| intestine | 99% | 222.04 | 960 / 966 | 29% | 0.56 | 151 / 527 |
| spleen | 100% | 321.18 | 241 / 241 | 0% | 0 | 0 / 0 |
| adipose | 100% | 337.20 | 1203 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 97% | 179.35 | 1299 / 1335 | 0% | 0 | 0 / 0 |
| heart | 93% | 195.52 | 802 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 79% | 2.30 | 23 / 29 |
| tonsil | 0% | 0 | 0 / 0 | 71% | 2.31 | 32 / 45 |
| muscle | 63% | 76.99 | 506 / 803 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 57% | 1.57 | 46 / 80 |
| peripheral blood | 21% | 36.35 | 197 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0051013 | Biological process | microtubule severing |
| GO_0031122 | Biological process | cytoplasmic microtubule organization |
| GO_0015630 | Cellular component | microtubule cytoskeleton |
| GO_0008352 | Cellular component | katanin complex |
| GO_0005874 | Cellular component | microtubule |
| GO_0000922 | Cellular component | spindle pole |
| GO_0005819 | Cellular component | spindle |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0008017 | Molecular function | microtubule binding |
| GO_0016853 | Molecular function | isomerase activity |
| GO_0008568 | Molecular function | microtubule severing ATPase activity |
| GO_0005515 | Molecular function | protein binding |
| GO_0016887 | Molecular function | ATP hydrolysis activity |
| GO_0005524 | Molecular function | ATP binding |
| Gene name | KATNAL2 |
| Protein name | Katanin p60 ATPase-containing subunit A-like 2 (Katanin p60 subunit A-like 2) (EC 5.6.1.1) (p60 katanin-like 2) Katanin catalytic subunit A1 like 2 |
| Synonyms | |
| Description | FUNCTION: Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. . FUNCTION: Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. . FUNCTION: Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. . |
| Accessions | ENST00000356157.12 [Q8IYT4-1] ENST00000588433.6 ENST00000688563.1 ENST00000591522.2 A0A8I5KXQ4 K7EPQ6 ENST00000685696.1 ENST00000685570.1 ENST00000245121.10 [Q8IYT4-2] A0A8I5KRY6 K7EMW1 A0A8I5KR23 ENST00000689545.1 ENST00000683218.1 [Q8IYT4-1] Q8IYT4 ENST00000585383.2 ENST00000688194.1 ENST00000687291.1 A0A8I5KYQ4 ENST00000687039.1 A0A8I5QJL5 ENST00000690453.1 ENST00000686215.1 ENST00000692939.1 A0A8I5KTG7 ENST00000693648.1 ENST00000586198.5 K7EM02 K7EIJ8 A0A8I5KR90 ENST00000592005.5 ENST00000585469.5 A0A8I5QL41 K7EQ00 |
