Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 5 studies | 24% ± 6% | |
retinal pigment epithelial cell | 3 studies | 18% ± 1% | |
GABAergic neuron | 3 studies | 22% ± 2% | |
glutamatergic neuron | 3 studies | 25% ± 4% | |
dendritic cell | 3 studies | 24% ± 5% | |
astrocyte | 3 studies | 22% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 20% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1051.14 | 1445 / 1445 | 100% | 19.59 | 183 / 183 |
lung | 100% | 1050.80 | 578 / 578 | 100% | 21.91 | 1155 / 1155 |
ovary | 100% | 1321.27 | 180 / 180 | 100% | 16.85 | 430 / 430 |
breast | 100% | 1132.65 | 459 / 459 | 100% | 24.87 | 1117 / 1118 |
thymus | 100% | 959.47 | 653 / 653 | 100% | 25.27 | 604 / 605 |
intestine | 100% | 1041.07 | 966 / 966 | 100% | 20.69 | 526 / 527 |
prostate | 100% | 928.08 | 245 / 245 | 100% | 19.98 | 501 / 502 |
uterus | 100% | 1242.76 | 170 / 170 | 100% | 28.51 | 458 / 459 |
stomach | 100% | 738.95 | 359 / 359 | 100% | 18.47 | 285 / 286 |
bladder | 100% | 1089.62 | 21 / 21 | 100% | 21.35 | 502 / 504 |
brain | 99% | 491.02 | 2622 / 2642 | 100% | 19.84 | 705 / 705 |
kidney | 100% | 790.25 | 89 / 89 | 99% | 17.39 | 892 / 901 |
adrenal gland | 100% | 635.88 | 257 / 258 | 97% | 13.97 | 224 / 230 |
skin | 100% | 1208.92 | 1809 / 1809 | 97% | 17.63 | 457 / 472 |
pancreas | 96% | 375.49 | 315 / 328 | 99% | 16.88 | 177 / 178 |
liver | 98% | 349.45 | 222 / 226 | 96% | 10.00 | 389 / 406 |
adipose | 100% | 1128.95 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1241.38 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 29.95 | 29 / 29 |
muscle | 100% | 1163.98 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1001.07 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 27.24 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.58 | 1 / 1 |
heart | 98% | 658.87 | 845 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 90% | 659.72 | 832 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 89% | 11.87 | 71 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0031122 | Biological process | cytoplasmic microtubule organization |
GO_0051013 | Biological process | microtubule severing |
GO_0051301 | Biological process | cell division |
GO_0097431 | Cellular component | mitotic spindle pole |
GO_0030496 | Cellular component | midbody |
GO_0005874 | Cellular component | microtubule |
GO_0000922 | Cellular component | spindle pole |
GO_0005813 | Cellular component | centrosome |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0008352 | Cellular component | katanin complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005819 | Cellular component | spindle |
GO_0008568 | Molecular function | microtubule severing ATPase activity |
GO_0008017 | Molecular function | microtubule binding |
GO_0005524 | Molecular function | ATP binding |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0016853 | Molecular function | isomerase activity |
GO_0005515 | Molecular function | protein binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
Gene name | KATNA1 |
Protein name | Multifunctional fusion protein [Includes: Katanin p60 ATPase-containing subunit A1 (Katanin p60 subunit A1) (EC 5.6.1.1) (p60 katanin); Katanin p60 ATPase-containing subunit A-like 1 (Katanin p60 subunit A-like 1) (p60 katanin-like 1)] Katanin catalytic subunit A1 Katanin p60 ATPase-containing subunit A1 (Katanin p60 subunit A1) (EC 5.6.1.1) (p60 katanin) |
Synonyms | KATNAL1 |
Description | FUNCTION: Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Microtubule release within the cell body of neurons may be required for their transport into neuronal processes by microtubule-dependent motor proteins. This transport is required for axonal growth. .; FUNCTION: Regulates microtubule dynamics in Sertoli cells, a process that is essential for spermiogenesis and male fertility. Severs microtubules in an ATP-dependent manner, promoting rapid reorganization of cellular microtubule arrays. . FUNCTION: Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Microtubule release within the cell body of neurons may be required for their transport into neuronal processes by microtubule-dependent motor proteins. This transport is required for axonal growth. . FUNCTION: Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Microtubule release within the cell body of neurons may be required for their transport into neuronal processes by microtubule-dependent motor proteins. This transport is required for axonal growth. . |
Accessions | ENST00000367411.7 [O75449-1] ENST00000335643.12 [O75449-2] ENST00000444282.5 ENST00000335647.9 [O75449-1] ENST00000420200.1 O75449 A8K7S5 B7ZBC9 B3KUK7 B7ZBC8 |