Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 6 studies | 40% ± 25% | |
GABAergic neuron | 5 studies | 36% ± 22% | |
neuron | 3 studies | 20% ± 2% | |
interneuron | 3 studies | 40% ± 24% | |
oligodendrocyte precursor cell | 3 studies | 20% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 30% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 96% | 12511.97 | 2546 / 2642 | 90% | 26.88 | 632 / 705 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.70 | 1 / 1 |
adrenal gland | 2% | 25.13 | 5 / 258 | 52% | 6.94 | 119 / 230 |
ovary | 0% | 0 | 0 / 180 | 27% | 1.69 | 115 / 430 |
pancreas | 0% | 0 | 0 / 328 | 24% | 1.24 | 42 / 178 |
esophagus | 3% | 35.91 | 38 / 1445 | 15% | 0.88 | 27 / 183 |
lung | 0% | 0 | 0 / 578 | 16% | 1.01 | 186 / 1155 |
uterus | 0% | 0 | 0 / 170 | 13% | 0.75 | 59 / 459 |
thymus | 0% | 0 | 0 / 653 | 12% | 0.32 | 75 / 605 |
breast | 0% | 0 | 0 / 459 | 12% | 0.56 | 134 / 1118 |
eye | 0% | 0 | 0 / 0 | 11% | 0.42 | 9 / 80 |
bladder | 0% | 0 | 0 / 21 | 11% | 0.65 | 56 / 504 |
lymph node | 0% | 0 | 0 / 0 | 10% | 0.25 | 3 / 29 |
stomach | 0% | 0 | 0 / 359 | 9% | 0.29 | 26 / 286 |
skin | 0% | 0 | 0 / 1809 | 7% | 0.41 | 31 / 472 |
intestine | 0% | 3.66 | 3 / 966 | 6% | 0.37 | 29 / 527 |
prostate | 0% | 0 | 0 / 245 | 4% | 0.09 | 18 / 502 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.06 | 1 / 45 |
kidney | 0% | 0 | 0 / 89 | 2% | 0.23 | 19 / 901 |
liver | 0% | 0 | 0 / 226 | 2% | 0.24 | 7 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adipose | 0% | 0 | 0 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 0 | 0 / 1335 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
GO_0007613 | Biological process | memory |
GO_0060402 | Biological process | calcium ion transport into cytosol |
GO_0048167 | Biological process | regulation of synaptic plasticity |
GO_0050885 | Biological process | neuromuscular process controlling balance |
GO_0035640 | Biological process | exploration behavior |
GO_0048168 | Biological process | regulation of neuronal synaptic plasticity |
GO_0040011 | Biological process | locomotion |
GO_0007612 | Biological process | learning |
GO_0060314 | Biological process | regulation of ryanodine-sensitive calcium-release channel activity |
GO_0014701 | Cellular component | junctional sarcoplasmic reticulum membrane |
GO_0030314 | Cellular component | junctional membrane complex |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | JPH3 |
Protein name | Junctophilin-3 (JP-3) (Junctophilin type 3) (Trinucleotide repeat-containing gene 22 protein) Junctophilin-3 |
Synonyms | JP3 TNRC22 |
Description | FUNCTION: Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. JPH3 is brain-specific and appears to have an active role in certain neurons involved in motor coordination and memory. |
Accessions | Q8WXH2 F8W9A3 ENST00000284262.3 [Q8WXH2-1] |