Insufficient scRNA-seq data for expression of JMJD4 at single-cell level.
Insufficient scRNA-seq data for expression of JMJD4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 409.07 | 459 / 459 | 100% | 8.14 | 1118 / 1118 |
liver | 100% | 366.60 | 226 / 226 | 100% | 5.98 | 406 / 406 |
ovary | 100% | 601.85 | 180 / 180 | 100% | 5.24 | 430 / 430 |
pancreas | 100% | 287.91 | 328 / 328 | 100% | 4.62 | 178 / 178 |
thymus | 100% | 437.48 | 653 / 653 | 100% | 5.72 | 605 / 605 |
uterus | 100% | 455.99 | 170 / 170 | 100% | 5.56 | 458 / 459 |
brain | 100% | 358.43 | 2635 / 2642 | 100% | 5.72 | 705 / 705 |
stomach | 100% | 310.22 | 359 / 359 | 100% | 4.46 | 285 / 286 |
bladder | 100% | 394.90 | 21 / 21 | 100% | 5.62 | 502 / 504 |
prostate | 100% | 618.47 | 245 / 245 | 100% | 8.45 | 500 / 502 |
adrenal gland | 100% | 802.54 | 258 / 258 | 100% | 5.24 | 229 / 230 |
skin | 100% | 357.00 | 1809 / 1809 | 99% | 5.86 | 469 / 472 |
kidney | 100% | 355.07 | 89 / 89 | 99% | 3.92 | 894 / 901 |
intestine | 100% | 349.61 | 966 / 966 | 99% | 5.31 | 521 / 527 |
esophagus | 100% | 359.00 | 1444 / 1445 | 99% | 4.00 | 181 / 183 |
lung | 98% | 296.50 | 567 / 578 | 100% | 4.84 | 1153 / 1155 |
eye | 0% | 0 | 0 / 0 | 100% | 5.88 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 6.68 | 29 / 29 |
spleen | 100% | 496.51 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 5.16 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.86 | 1 / 1 |
adipose | 100% | 331.67 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 288.84 | 1331 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 265.12 | 797 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 250.00 | 853 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 88% | 215.50 | 813 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045905 | Biological process | positive regulation of translational termination |
GO_0018126 | Biological process | protein hydroxylation |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0106156 | Molecular function | peptidyl-lysine 4-dioxygenase activity |
GO_0005515 | Molecular function | protein binding |
GO_0043565 | Molecular function | sequence-specific DNA binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0016706 | Molecular function | 2-oxoglutarate-dependent dioxygenase activity |
Gene name | JMJD4 |
Protein name | Alternative protein JMJD4 2-oxoglutarate and iron-dependent oxygenase JMJD4 (EC 1.14.11.-) (JmjC domain-containing protein 4) (Jumonji domain-containing protein 4) (Lysyl-hydroxylase JMJD4) |
Synonyms | |
Description | FUNCTION: Catalyzes the 2-oxoglutarate and iron-dependent C4-lysyl hydroxylation of ETF1 at 'Lys-63' thereby promoting the translational termination efficiency of ETF1. . |
Accessions | Q9H9V9 ENST00000620518.5 [Q9H9V9-3] ENST00000438896.3 [Q9H9V9-2] L8ECK0 |