Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 18 studies | 48% ± 18% | |
oligodendrocyte | 15 studies | 39% ± 13% | |
glutamatergic neuron | 12 studies | 62% ± 22% | |
oligodendrocyte precursor cell | 12 studies | 39% ± 15% | |
GABAergic neuron | 11 studies | 57% ± 25% | |
neuron | 6 studies | 46% ± 15% | |
interneuron | 6 studies | 68% ± 18% | |
retinal ganglion cell | 6 studies | 49% ± 17% | |
retina horizontal cell | 6 studies | 50% ± 12% | |
amacrine cell | 5 studies | 34% ± 9% | |
endothelial cell | 4 studies | 40% ± 22% | |
granule cell | 4 studies | 62% ± 9% | |
GABAergic interneuron | 3 studies | 64% ± 4% | |
macrophage | 3 studies | 27% ± 13% | |
GABAergic amacrine cell | 3 studies | 45% ± 6% | |
OFF-bipolar cell | 3 studies | 31% ± 5% | |
ON-bipolar cell | 3 studies | 33% ± 8% | |
glycinergic amacrine cell | 3 studies | 41% ± 5% | |
ependymal cell | 3 studies | 49% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2536.04 | 2642 / 2642 | 99% | 20.31 | 700 / 705 |
adrenal gland | 64% | 324.48 | 165 / 258 | 92% | 9.85 | 212 / 230 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.23 | 1 / 1 |
lung | 30% | 98.87 | 175 / 578 | 30% | 1.96 | 351 / 1155 |
intestine | 48% | 209.82 | 466 / 966 | 6% | 0.16 | 32 / 527 |
pancreas | 1% | 3.03 | 4 / 328 | 48% | 1.45 | 86 / 178 |
uterus | 35% | 120.98 | 59 / 170 | 14% | 0.61 | 63 / 459 |
stomach | 31% | 290.39 | 110 / 359 | 9% | 0.19 | 25 / 286 |
lymph node | 0% | 0 | 0 / 0 | 38% | 0.80 | 11 / 29 |
bladder | 24% | 76.24 | 5 / 21 | 14% | 0.46 | 70 / 504 |
prostate | 24% | 70.64 | 59 / 245 | 2% | 0.02 | 8 / 502 |
liver | 10% | 29.56 | 22 / 226 | 14% | 0.32 | 55 / 406 |
esophagus | 3% | 10.32 | 43 / 1445 | 17% | 0.85 | 31 / 183 |
skin | 1% | 4.01 | 27 / 1809 | 16% | 0.66 | 77 / 472 |
ovary | 1% | 2.89 | 2 / 180 | 15% | 0.44 | 66 / 430 |
blood vessel | 12% | 51.24 | 161 / 1335 | 0% | 0 | 0 / 0 |
thymus | 0% | 0 | 0 / 653 | 12% | 0.67 | 72 / 605 |
peripheral blood | 7% | 21.51 | 63 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 7% | 0.08 | 3 / 45 |
spleen | 7% | 17.90 | 16 / 241 | 0% | 0 | 0 / 0 |
breast | 0% | 0 | 0 / 459 | 7% | 0.18 | 73 / 1118 |
kidney | 2% | 4.82 | 2 / 89 | 3% | 0.07 | 23 / 901 |
adipose | 4% | 12.71 | 50 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 3% | 0.04 | 2 / 80 |
heart | 1% | 2.11 | 8 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0019900 | Molecular function | kinase binding |
GO_0008017 | Molecular function | microtubule binding |
GO_0005515 | Molecular function | protein binding |
Gene name | JAKMIP2 |
Protein name | Janus kinase and microtubule-interacting protein 2 (CTCL tumor antigen HD-CL-04) (Neuroendocrine long coiled-coil protein 1) JAKMIP2 protein |
Synonyms | NECC1 KIAA0555 JAMIP2 |
Description | |
Accessions | ENST00000507386.5 [Q96AA8-2] ENST00000333010.6 [Q96AA8-4] Q96AA8 ENST00000616793.5 [Q96AA8-3] ENST00000265272.9 [Q96AA8-1] Q05DV4 |