ISM2 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
extravillous trophoblast	3 studies	72% ± 6%	Explore
placental villous trophoblast	3 studies	62% ± 21%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	99%	297.88	243 / 245	52%	1.50	261 / 502
uterus	94%	196.09	159 / 170	20%	0.78	92 / 459
kidney	96%	81.12	85 / 89	17%	0.91	156 / 901
ureter	0%	0	0 / 0	100%	3.27	1 / 1
ovary	39%	12.91	71 / 180	31%	1.41	132 / 430
thymus	59%	16.75	383 / 653	11%	0.21	64 / 605
brain	62%	76.65	1649 / 2642	5%	0.09	34 / 705
intestine	37%	23.20	362 / 966	28%	2.25	147 / 527
bladder	38%	46.81	8 / 21	20%	1.06	100 / 504
esophagus	46%	28.16	671 / 1445	9%	0.43	17 / 183
adipose	43%	43.52	518 / 1204	0%	0	0 / 0
spleen	41%	10.12	98 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	38%	2.16	17 / 45
stomach	4%	1.29	15 / 359	23%	1.36	65 / 286
breast	25%	5.70	116 / 459	1%	0.02	11 / 1118
lung	3%	1.81	19 / 578	19%	1.18	223 / 1155
adrenal gland	14%	3.75	36 / 258	7%	0.17	17 / 230
peripheral blood	21%	8.28	192 / 929	0%	0	0 / 0
skin	16%	4.02	298 / 1809	2%	0.08	9 / 472
blood vessel	7%	1.71	90 / 1335	0%	0	0 / 0
heart	7%	7.89	57 / 861	0%	0	0 / 0
liver	0%	0.08	1 / 226	4%	0.16	16 / 406
pancreas	0%	0	0 / 328	4%	0.28	7 / 178
lymph node	0%	0	0 / 0	3%	0.33	1 / 29
muscle	1%	0.20	7 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0