IRGQ report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
GABAergic neuron	3 studies	24% ± 5%	Explore
glutamatergic neuron	3 studies	28% ± 9%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	20% ± 5%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	3456.23	245 / 245	100%	14.62	502 / 502
brain	100%	3636.15	2640 / 2642	100%	18.52	705 / 705
breast	100%	2138.75	459 / 459	100%	13.98	1116 / 1118
thymus	100%	2698.62	653 / 653	100%	12.09	603 / 605
skin	100%	2168.81	1809 / 1809	100%	15.42	470 / 472
esophagus	100%	2745.96	1445 / 1445	99%	16.25	182 / 183
intestine	100%	2667.87	966 / 966	99%	10.59	524 / 527
stomach	100%	1977.97	359 / 359	99%	11.99	284 / 286
bladder	100%	2637.19	21 / 21	99%	11.05	500 / 504
uterus	100%	2981.24	170 / 170	99%	12.35	454 / 459
kidney	100%	2468.72	89 / 89	99%	9.98	891 / 901
lung	100%	3051.43	578 / 578	98%	11.76	1135 / 1155
pancreas	99%	1349.69	326 / 328	99%	10.51	176 / 178
adrenal gland	100%	2727.99	258 / 258	97%	15.02	224 / 230
liver	100%	1398.95	226 / 226	95%	7.38	386 / 406
ovary	100%	3282.29	180 / 180	93%	9.10	398 / 430
adipose	100%	1950.46	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	9.08	29 / 29
muscle	100%	2346.39	803 / 803	0%	0	0 / 0
spleen	100%	2221.56	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	12.23	45 / 45
ureter	0%	0	0 / 0	100%	9.15	1 / 1
blood vessel	100%	2334.21	1334 / 1335	0%	0	0 / 0
heart	100%	2496.01	858 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	99%	11.09	79 / 80
peripheral blood	87%	1472.98	809 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0