Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 12 studies | 29% ± 15% | |
glutamatergic neuron | 8 studies | 69% ± 28% | |
oligodendrocyte | 8 studies | 51% ± 16% | |
GABAergic neuron | 7 studies | 45% ± 24% | |
microglial cell | 5 studies | 34% ± 20% | |
adipocyte | 5 studies | 18% ± 4% | |
oligodendrocyte precursor cell | 4 studies | 30% ± 8% | |
cardiac muscle cell | 4 studies | 37% ± 12% | |
retinal cone cell | 4 studies | 63% ± 14% | |
retinal ganglion cell | 4 studies | 60% ± 21% | |
smooth muscle cell | 4 studies | 22% ± 6% | |
interneuron | 4 studies | 48% ± 24% | |
astrocyte | 4 studies | 42% ± 28% | |
neuron | 3 studies | 27% ± 4% | |
OFF-bipolar cell | 3 studies | 73% ± 21% | |
ON-bipolar cell | 3 studies | 72% ± 30% | |
retina horizontal cell | 3 studies | 59% ± 12% | |
type I pneumocyte | 3 studies | 41% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 96% | 290.89 | 2545 / 2642 | 85% | 2.46 | 598 / 705 |
kidney | 94% | 141.92 | 84 / 89 | 62% | 2.61 | 562 / 901 |
lung | 97% | 234.69 | 560 / 578 | 59% | 1.67 | 682 / 1155 |
esophagus | 87% | 403.93 | 1259 / 1445 | 68% | 2.78 | 124 / 183 |
uterus | 95% | 251.61 | 162 / 170 | 53% | 1.49 | 244 / 459 |
bladder | 100% | 429.14 | 21 / 21 | 40% | 0.76 | 200 / 504 |
breast | 98% | 212.99 | 451 / 459 | 15% | 0.29 | 164 / 1118 |
prostate | 90% | 200.43 | 220 / 245 | 20% | 0.31 | 99 / 502 |
intestine | 81% | 359.63 | 782 / 966 | 22% | 0.47 | 117 / 527 |
blood vessel | 100% | 545.79 | 1333 / 1335 | 0% | 0 | 0 / 0 |
adipose | 98% | 254.73 | 1180 / 1204 | 0% | 0 | 0 / 0 |
heart | 92% | 209.60 | 794 / 861 | 0% | 0 | 0 / 0 |
skin | 62% | 83.60 | 1117 / 1809 | 28% | 0.60 | 132 / 472 |
stomach | 54% | 202.03 | 194 / 359 | 35% | 1.07 | 101 / 286 |
ovary | 24% | 41.81 | 43 / 180 | 60% | 1.38 | 259 / 430 |
tonsil | 0% | 0 | 0 / 0 | 69% | 1.82 | 31 / 45 |
thymus | 61% | 63.70 | 397 / 653 | 6% | 0.13 | 39 / 605 |
liver | 44% | 42.52 | 99 / 226 | 15% | 0.25 | 62 / 406 |
muscle | 44% | 46.12 | 350 / 803 | 0% | 0 | 0 / 0 |
pancreas | 1% | 0.54 | 2 / 328 | 32% | 0.55 | 57 / 178 |
adrenal gland | 6% | 5.79 | 16 / 258 | 26% | 0.52 | 60 / 230 |
spleen | 16% | 12.29 | 39 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.04 | 1 / 29 |
peripheral blood | 0% | 0.06 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0035332 | Biological process | positive regulation of hippo signaling |
GO_0051494 | Biological process | negative regulation of cytoskeleton organization |
GO_0030054 | Cellular component | cell junction |
GO_0043194 | Cellular component | axon initial segment |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | IQCJ-SCHIP1 |
Protein name | IQCJ-SCHIP1 readthrough transcript protein IQCJ-SCHIP1 readthrough (Schwannomin interacting protein 1, isoform CRA_a) IQCJ-SCHIP1 readthrough |
Synonyms | hCG_2022069 SCHIP1 |
Description | FUNCTION: May play a role in action potential conduction in myelinated cells through the organization of molecular complexes at nodes of Ranvier and axon initial segments . May also play a role in axon outgrowth and guidance (By similarity). . |
Accessions | A0A1W2PRV6 ENST00000639631.1 ENST00000640565.1 A0A1W2PRY4 ENST00000460298.3 ENST00000476809.7 [B3KU38-2] A0A1W2PPY3 ENST00000639448.1 C9J366 ENST00000639298.1 ENST00000638311.1 ENST00000640015.1 A0A1W2PP08 ENST00000689690.1 A0A8I5KTZ3 A0A1W2PR91 ENST00000485419.7 [B3KU38-1] ENST00000639979.1 A0A1W2PR78 A0A1W2PQT1 B3KU38 |