Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 5 studies | 33% ± 11% | |
glutamatergic neuron | 4 studies | 39% ± 14% | |
oligodendrocyte precursor cell | 4 studies | 24% ± 6% | |
macrophage | 4 studies | 19% ± 3% | |
oligodendrocyte | 4 studies | 23% ± 5% | |
endothelial cell | 3 studies | 22% ± 8% | |
microglial cell | 3 studies | 18% ± 1% | |
GABAergic neuron | 3 studies | 42% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 986.13 | 1445 / 1445 | 100% | 14.07 | 183 / 183 |
prostate | 100% | 1024.76 | 245 / 245 | 100% | 12.14 | 502 / 502 |
skin | 100% | 1061.21 | 1809 / 1809 | 100% | 24.71 | 472 / 472 |
stomach | 100% | 816.42 | 359 / 359 | 100% | 13.60 | 286 / 286 |
lung | 100% | 1032.95 | 578 / 578 | 100% | 13.14 | 1154 / 1155 |
thymus | 100% | 1282.46 | 653 / 653 | 100% | 16.90 | 604 / 605 |
breast | 100% | 1004.59 | 459 / 459 | 100% | 15.83 | 1116 / 1118 |
ovary | 100% | 886.15 | 180 / 180 | 100% | 12.61 | 429 / 430 |
intestine | 100% | 924.06 | 966 / 966 | 100% | 12.75 | 525 / 527 |
uterus | 100% | 1172.70 | 170 / 170 | 100% | 15.89 | 457 / 459 |
kidney | 100% | 948.36 | 89 / 89 | 99% | 11.84 | 895 / 901 |
bladder | 100% | 1204.71 | 21 / 21 | 99% | 13.85 | 500 / 504 |
brain | 99% | 540.88 | 2618 / 2642 | 100% | 15.48 | 705 / 705 |
pancreas | 99% | 576.97 | 326 / 328 | 99% | 11.80 | 177 / 178 |
adrenal gland | 100% | 2342.26 | 258 / 258 | 99% | 11.66 | 227 / 230 |
liver | 94% | 324.08 | 212 / 226 | 70% | 4.63 | 283 / 406 |
adipose | 100% | 988.46 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 19.95 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 24.71 | 29 / 29 |
spleen | 100% | 1618.39 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.59 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.36 | 1 / 1 |
blood vessel | 100% | 775.10 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 774.78 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 783.25 | 854 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 920.83 | 894 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0034243 | Biological process | regulation of transcription elongation by RNA polymerase II |
GO_0016180 | Biological process | snRNA processing |
GO_0034472 | Biological process | snRNA 3'-end processing |
GO_0030512 | Biological process | negative regulation of transforming growth factor beta receptor signaling pathway |
GO_0032039 | Cellular component | integrator complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | INTS9 |
Protein name | Integrator complex subunit 9 (Int9) (Protein related to CPSF subunits of 74 kDa) (RC-74) Integrator complex subunit 9 |
Synonyms | RC74 hCG_16729 |
Description | FUNCTION: Component of the Integrator (INT) complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. The Integrator complex is associated with the C-terminal domain (CTD) of RNA polymerase II largest subunit (POLR2A) and is recruited to the U1 and U2 snRNAs genes (Probable). Mediates recruitment of cytoplasmic dynein to the nuclear envelope, probably as component of the INT complex . . |
Accessions | ENST00000521777.5 [Q9NV88-3] Q9NV88 ENST00000517383.1 ENST00000522363.5 G3XAN1 E5RJ88 H0YBQ3 ENST00000524081.5 ENST00000523436.5 ENST00000518510.5 ENST00000521022.6 [Q9NV88-1] E5RG70 ENST00000523303.5 ENST00000520437.1 H0YBK3 ENST00000416984.6 [Q9NV88-2] E5RGY2 ENST00000520184.1 E5RK47 H0YBH8 |