Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 5 studies | 32% ± 12% | |
oligodendrocyte | 5 studies | 24% ± 5% | |
oligodendrocyte precursor cell | 4 studies | 25% ± 6% | |
epithelial cell | 3 studies | 18% ± 3% | |
GABAergic neuron | 3 studies | 35% ± 5% | |
transit amplifying cell | 3 studies | 28% ± 15% | |
interneuron | 3 studies | 40% ± 15% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 30% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 100% | 741.35 | 170 / 170 | 100% | 27.64 | 458 / 459 |
esophagus | 100% | 871.21 | 1440 / 1445 | 100% | 28.12 | 183 / 183 |
lung | 100% | 813.54 | 576 / 578 | 100% | 23.14 | 1155 / 1155 |
breast | 100% | 724.29 | 458 / 459 | 100% | 35.26 | 1116 / 1118 |
intestine | 100% | 751.42 | 964 / 966 | 100% | 20.60 | 526 / 527 |
bladder | 100% | 735.62 | 21 / 21 | 100% | 18.88 | 502 / 504 |
ovary | 100% | 660.36 | 180 / 180 | 100% | 16.01 | 428 / 430 |
stomach | 99% | 544.80 | 357 / 359 | 100% | 21.90 | 286 / 286 |
prostate | 100% | 955.25 | 245 / 245 | 99% | 14.56 | 499 / 502 |
brain | 99% | 657.91 | 2627 / 2642 | 100% | 17.61 | 703 / 705 |
thymus | 100% | 954.01 | 653 / 653 | 99% | 15.23 | 599 / 605 |
liver | 100% | 780.95 | 226 / 226 | 99% | 16.31 | 401 / 406 |
pancreas | 99% | 520.88 | 325 / 328 | 99% | 12.70 | 176 / 178 |
skin | 100% | 1262.86 | 1805 / 1809 | 98% | 24.49 | 463 / 472 |
adrenal gland | 100% | 937.27 | 258 / 258 | 93% | 12.85 | 215 / 230 |
kidney | 100% | 544.06 | 89 / 89 | 90% | 8.21 | 807 / 901 |
lymph node | 0% | 0 | 0 / 0 | 100% | 20.24 | 29 / 29 |
spleen | 100% | 938.75 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 27.28 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.22 | 1 / 1 |
adipose | 100% | 683.59 | 1200 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 686.24 | 1328 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 632.26 | 792 / 803 | 0% | 0 | 0 / 0 |
heart | 96% | 531.50 | 826 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 91% | 10.95 | 73 / 80 |
peripheral blood | 86% | 1031.92 | 803 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0034243 | Biological process | regulation of transcription elongation by RNA polymerase II |
GO_0016180 | Biological process | snRNA processing |
GO_0034472 | Biological process | snRNA 3'-end processing |
GO_0071479 | Biological process | cellular response to ionizing radiation |
GO_0000077 | Biological process | DNA damage checkpoint signaling |
GO_0032039 | Cellular component | integrator complex |
GO_0005694 | Cellular component | chromosome |
GO_0016604 | Cellular component | nuclear body |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | INTS7 |
Protein name | Integrator complex subunit 7 Integrator complex subunit 7 (Int7) |
Synonyms | C1orf73 |
Description | FUNCTION: Component of the Integrator (INT) complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. The Integrator complex is associated with the C-terminal domain (CTD) of RNA polymerase II largest subunit (POLR2A) and is recruited to the U1 and U2 snRNAs genes (Probable). Plays a role in DNA damage response (DDR) signaling during the S phase . May be not involved in the recruitment of cytoplasmic dynein to the nuclear envelope by different components of the INT complex . . |
Accessions | ENST00000366994.8 [Q9NVH2-1] ENST00000612340.1 A0A087X1Q0 ENST00000440600.6 [Q9NVH2-4] A0A087WXK3 ENST00000469606.5 ENST00000366993.7 [Q9NVH2-2] ENST00000366992.7 [Q9NVH2-3] A0A087WYC2 ENST00000619805.1 Q9NVH2 ENST00000475798.5 A0A087X0F3 |