INF2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
oligodendrocyte	11 studies	32% ± 11%	Explore
endothelial cell	7 studies	24% ± 5%	Explore
epithelial cell	7 studies	22% ± 4%	Explore
type I pneumocyte	6 studies	21% ± 5%	Explore
smooth muscle cell	4 studies	19% ± 1%	Explore
goblet cell	4 studies	22% ± 4%	Explore
platelet	3 studies	19% ± 3%	Explore
pericyte	3 studies	20% ± 1%	Explore
macrophage	3 studies	20% ± 4%	Explore
dendritic cell	3 studies	23% ± 1%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	29% ± 8%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	8151.69	1442 / 1445	100%	53.17	183 / 183
intestine	100%	11626.84	966 / 966	100%	54.59	525 / 527
stomach	100%	9363.85	359 / 359	99%	48.07	284 / 286
uterus	100%	8377.58	170 / 170	99%	34.27	453 / 459
skin	100%	8703.46	1808 / 1809	98%	41.04	464 / 472
bladder	100%	9276.67	21 / 21	98%	39.37	493 / 504
breast	100%	12609.24	459 / 459	98%	29.56	1092 / 1118
lung	100%	11395.13	577 / 578	98%	30.82	1130 / 1155
thymus	100%	7053.72	651 / 653	96%	34.24	582 / 605
prostate	100%	8039.46	244 / 245	95%	14.97	475 / 502
liver	100%	7376.09	226 / 226	94%	23.59	380 / 406
ovary	94%	4135.66	169 / 180	99%	40.41	425 / 430
kidney	100%	9316.85	89 / 89	91%	33.30	822 / 901
adrenal gland	100%	6400.70	257 / 258	82%	15.00	189 / 230
brain	85%	8199.57	2236 / 2642	95%	22.92	673 / 705
pancreas	81%	2663.33	265 / 328	99%	61.41	176 / 178
adipose	100%	14465.88	1204 / 1204	0%	0	0 / 0
blood vessel	100%	15248.27	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	55.47	80 / 80
lymph node	0%	0	0 / 0	100%	21.26	29 / 29
spleen	100%	12124.32	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	36.80	1 / 1
heart	99%	5062.69	849 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	98%	22.41	44 / 45
muscle	71%	2471.66	571 / 803	0%	0	0 / 0
peripheral blood	44%	1611.03	407 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0