INAFM2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
platelet	3 studies	26% ± 8%	Explore
hematopoietic stem cell	3 studies	24% ± 5%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	3534.50	652 / 653	100%	51.98	605 / 605
bladder	100%	2304.62	21 / 21	99%	21.51	497 / 504
prostate	98%	1598.51	241 / 245	100%	34.47	502 / 502
breast	99%	1244.83	455 / 459	99%	20.17	1109 / 1118
brain	98%	1748.51	2593 / 2642	100%	45.96	705 / 705
lung	99%	1808.49	574 / 578	99%	22.40	1140 / 1155
adrenal gland	99%	1061.44	255 / 258	98%	37.73	225 / 230
intestine	99%	5163.22	958 / 966	97%	15.74	510 / 527
esophagus	99%	2911.40	1426 / 1445	96%	14.10	176 / 183
uterus	98%	1811.20	166 / 170	97%	20.80	446 / 459
stomach	94%	3986.88	339 / 359	98%	17.83	280 / 286
skin	92%	952.43	1657 / 1809	98%	23.23	464 / 472
ovary	88%	1456.11	158 / 180	98%	14.88	421 / 430
pancreas	84%	699.03	274 / 328	100%	25.76	178 / 178
kidney	79%	735.66	70 / 89	96%	21.96	867 / 901
blood vessel	100%	6349.42	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	17.08	29 / 29
spleen	100%	1597.17	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	7.59	1 / 1
adipose	99%	1321.37	1196 / 1204	0%	0	0 / 0
tonsil	0%	0	0 / 0	98%	13.51	44 / 45
heart	97%	2721.87	832 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	95%	16.70	76 / 80
muscle	92%	1191.01	740 / 803	0%	0	0 / 0
liver	23%	155.89	51 / 226	58%	5.54	234 / 406
peripheral blood	69%	768.40	639 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0