Name | Number of supported studies | Average coverage | |
---|---|---|---|
retinal rod cell | 7 studies | 21% ± 5% |
Insufficient scRNA-seq data for expression of IGSF9 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 88% | 2033.47 | 216 / 245 | 95% | 12.66 | 476 / 502 |
breast | 57% | 747.77 | 262 / 459 | 96% | 31.54 | 1076 / 1118 |
liver | 97% | 4492.00 | 220 / 226 | 41% | 7.57 | 166 / 406 |
stomach | 61% | 1263.67 | 219 / 359 | 76% | 11.36 | 216 / 286 |
thymus | 75% | 417.55 | 487 / 653 | 59% | 10.25 | 354 / 605 |
esophagus | 39% | 887.74 | 558 / 1445 | 92% | 34.98 | 169 / 183 |
ovary | 27% | 125.47 | 48 / 180 | 99% | 45.88 | 424 / 430 |
intestine | 42% | 1486.16 | 408 / 966 | 81% | 11.66 | 427 / 527 |
bladder | 38% | 425.76 | 8 / 21 | 85% | 25.56 | 429 / 504 |
uterus | 29% | 204.48 | 49 / 170 | 92% | 32.33 | 422 / 459 |
pancreas | 34% | 167.03 | 113 / 328 | 77% | 15.52 | 137 / 178 |
tonsil | 0% | 0 | 0 / 0 | 100% | 48.35 | 45 / 45 |
lung | 13% | 80.86 | 75 / 578 | 83% | 27.86 | 962 / 1155 |
skin | 72% | 3004.97 | 1304 / 1809 | 5% | 1.02 | 23 / 472 |
adipose | 32% | 535.91 | 382 / 1204 | 0% | 0 | 0 / 0 |
spleen | 15% | 63.98 | 35 / 241 | 0% | 0 | 0 / 0 |
kidney | 11% | 81.26 | 10 / 89 | 1% | 0.13 | 12 / 901 |
heart | 11% | 59.97 | 94 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.86 | 2 / 29 |
brain | 1% | 3.66 | 27 / 2642 | 4% | 0.38 | 26 / 705 |
eye | 0% | 0 | 0 / 0 | 1% | 0.61 | 1 / 80 |
blood vessel | 1% | 7.11 | 15 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.93 | 2 / 929 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.70 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adrenal gland | 0% | 0 | 0 / 258 | 0% | 0 | 0 / 230 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0050807 | Biological process | regulation of synapse organization |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0016358 | Biological process | dendrite development |
GO_0007411 | Biological process | axon guidance |
GO_0070593 | Biological process | dendrite self-avoidance |
GO_0030424 | Cellular component | axon |
GO_0060077 | Cellular component | inhibitory synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0030425 | Cellular component | dendrite |
GO_0098632 | Molecular function | cell-cell adhesion mediator activity |
Gene name | IGSF9 |
Protein name | Protein turtle homolog A (Immunoglobulin superfamily member 9A) (IgSF9A) |
Synonyms | IGSF9A NRT1 KIAA1355 |
Description | FUNCTION: Functions in dendrite outgrowth and synapse maturation. . |
Accessions | ENST00000361509.7 [Q9P2J2-2] Q9P2J2 ENST00000368094.6 [Q9P2J2-1] |