Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 11 studies | 29% ± 10% | |
glutamatergic neuron | 11 studies | 57% ± 25% | |
astrocyte | 11 studies | 34% ± 13% | |
oligodendrocyte precursor cell | 10 studies | 33% ± 14% | |
GABAergic neuron | 8 studies | 50% ± 26% | |
neuron | 5 studies | 30% ± 6% | |
endothelial cell | 5 studies | 29% ± 13% | |
interneuron | 5 studies | 55% ± 22% | |
epithelial cell | 4 studies | 20% ± 3% | |
retinal ganglion cell | 4 studies | 24% ± 8% | |
oligodendrocyte | 4 studies | 28% ± 9% | |
B cell | 3 studies | 21% ± 2% | |
GABAergic interneuron | 3 studies | 35% ± 4% | |
retinal bipolar neuron | 3 studies | 19% ± 2% | |
rod bipolar cell | 3 studies | 21% ± 5% | |
ependymal cell | 3 studies | 48% ± 12% | |
granule cell | 3 studies | 41% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2959.86 | 2641 / 2642 | 100% | 11.50 | 705 / 705 |
thymus | 99% | 1185.06 | 649 / 653 | 98% | 5.04 | 591 / 605 |
prostate | 100% | 1411.14 | 244 / 245 | 97% | 2.70 | 489 / 502 |
adrenal gland | 99% | 702.60 | 255 / 258 | 89% | 5.61 | 205 / 230 |
ovary | 100% | 1851.31 | 180 / 180 | 78% | 2.19 | 337 / 430 |
breast | 98% | 915.92 | 451 / 459 | 67% | 1.78 | 746 / 1118 |
kidney | 85% | 486.06 | 76 / 89 | 73% | 1.85 | 655 / 901 |
uterus | 99% | 1954.83 | 168 / 170 | 51% | 1.54 | 232 / 459 |
esophagus | 77% | 990.78 | 1116 / 1445 | 72% | 1.72 | 131 / 183 |
lung | 86% | 549.61 | 495 / 578 | 60% | 1.38 | 695 / 1155 |
bladder | 95% | 1299.71 | 20 / 21 | 44% | 0.97 | 224 / 504 |
pancreas | 72% | 362.11 | 237 / 328 | 67% | 1.77 | 120 / 178 |
stomach | 80% | 781.30 | 288 / 359 | 41% | 0.89 | 117 / 286 |
intestine | 80% | 1066.01 | 774 / 966 | 25% | 0.47 | 134 / 527 |
skin | 70% | 337.86 | 1267 / 1809 | 34% | 0.68 | 160 / 472 |
blood vessel | 99% | 976.63 | 1324 / 1335 | 0% | 0 | 0 / 0 |
adipose | 97% | 859.33 | 1173 / 1204 | 0% | 0 | 0 / 0 |
muscle | 89% | 543.34 | 714 / 803 | 0% | 0 | 0 / 0 |
heart | 85% | 613.06 | 732 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 66% | 1.22 | 19 / 29 |
spleen | 43% | 174.44 | 104 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 38% | 0.64 | 17 / 45 |
peripheral blood | 15% | 63.60 | 135 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 13% | 0.23 | 10 / 80 |
liver | 0% | 0 | 0 / 226 | 11% | 0.21 | 43 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0051049 | Biological process | regulation of transport |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0019904 | Molecular function | protein domain specific binding |
GO_0005515 | Molecular function | protein binding |
Gene name | ICA1L |
Protein name | Islet cell autoantigen 1-like protein (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 14 protein) (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 15 protein) ALS2CR14 protein (Islet cell autoantigen 1,69kDa-like) Islet cell autoantigen 1 like |
Synonyms | ALS2CR15 ALS2CR14 |
Description | |
Accessions | C9J101 Q96Q33 ENST00000421334.1 ENST00000358299.7 [Q8NDH6-1] F8WBQ1 C9J0T2 C9JRB6 C9J9Z8 ENST00000454326.5 ENST00000432273.5 Q8NDH6 C9J5Z0 C9JP49 ENST00000392237.6 [Q8NDH6-1] ENST00000617388.4 [Q8NDH6-1] C9JEN4 ENST00000450143.5 C9JEP0 ENST00000412210.5 C9JDM8 C9JDK6 ENST00000416760.5 ENST00000425178.5 [Q8NDH6-2] ENST00000441547.5 ENST00000420558.5 ENST00000438804.5 ENST00000418208.5 ENST00000411681.5 C9JAQ4 ENST00000435143.5 ENST00000457524.5 ENST00000419460.5 C9J1M7 |