HTRA4 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
extravillous trophoblast	3 studies	50% ± 4%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	99%	177.51	575 / 578	67%	2.61	776 / 1155
breast	91%	40.66	417 / 459	40%	1.01	450 / 1118
bladder	86%	33.67	18 / 21	29%	1.18	145 / 504
kidney	57%	9.09	51 / 89	57%	2.59	510 / 901
thymus	81%	26.01	529 / 653	32%	0.79	194 / 605
uterus	81%	52.44	138 / 170	27%	0.66	123 / 459
intestine	76%	23.84	736 / 966	25%	0.61	131 / 527
spleen	100%	108.50	241 / 241	0%	0	0 / 0
prostate	83%	25.15	204 / 245	17%	0.29	83 / 502
adrenal gland	94%	43.97	242 / 258	3%	0.07	7 / 230
adipose	93%	77.79	1117 / 1204	0%	0	0 / 0
skin	49%	12.47	884 / 1809	42%	1.36	196 / 472
lymph node	0%	0	0 / 0	90%	20.63	26 / 29
pancreas	19%	3.65	63 / 328	60%	1.45	107 / 178
eye	0%	0	0 / 0	78%	5.05	62 / 80
esophagus	54%	13.15	774 / 1445	21%	0.42	38 / 183
stomach	32%	4.45	116 / 359	31%	0.90	89 / 286
ovary	52%	11.30	93 / 180	10%	0.17	43 / 430
peripheral blood	58%	11.81	542 / 929	0%	0	0 / 0
blood vessel	52%	23.47	697 / 1335	0%	0	0 / 0
tonsil	0%	0	0 / 0	42%	1.32	19 / 45
liver	31%	4.07	70 / 226	8%	0.22	33 / 406
brain	17%	3.99	439 / 2642	7%	0.28	51 / 705
heart	20%	2.89	170 / 861	0%	0	0 / 0
muscle	15%	2.77	121 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1