HTR3B | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of HTR3B at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
kidney	65%	10.38	58 / 89	3%	0.10	30 / 901
brain	55%	38.70	1446 / 2642	13%	0.55	95 / 705
esophagus	36%	11.85	525 / 1445	2%	0.03	3 / 183
intestine	28%	3.07	272 / 966	1%	0.02	4 / 527
lymph node	0%	0	0 / 0	14%	0.34	4 / 29
peripheral blood	12%	1.14	107 / 929	0%	0	0 / 0
skin	6%	0.58	109 / 1809	5%	0.28	23 / 472
ovary	0%	0	0 / 180	7%	0.16	28 / 430
stomach	5%	0.40	18 / 359	1%	0.02	4 / 286
spleen	6%	0.45	15 / 241	0%	0	0 / 0
eye	0%	0	0 / 0	5%	0.08	4 / 80
prostate	3%	0.20	8 / 245	0%	0.01	2 / 502
lung	0%	0.03	2 / 578	2%	0.23	25 / 1155
pancreas	2%	0.20	8 / 328	0%	0	0 / 178
tonsil	0%	0	0 / 0	2%	0.03	1 / 45
liver	0%	0	0 / 226	2%	0.03	7 / 406
uterus	1%	0.11	2 / 170	0%	0.01	2 / 459
bladder	0%	0	0 / 21	1%	0.06	6 / 504
adrenal gland	0%	0.02	1 / 258	0%	0.01	1 / 230
breast	0%	0.01	1 / 459	0%	0.00	3 / 1118
heart	0%	0.03	4 / 861	0%	0	0 / 0
thymus	0%	0.02	2 / 653	0%	0	0 / 605
muscle	0%	0.01	1 / 803	0%	0	0 / 0
adipose	0%	0.00	1 / 1204	0%	0	0 / 0
blood vessel	0%	0.00	1 / 1335	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0034220	Biological process	monoatomic ion transmembrane transport
GO_0042391	Biological process	regulation of membrane potential
GO_0007268	Biological process	chemical synaptic transmission
GO_0007210	Biological process	serotonin receptor signaling pathway
GO_0098662	Biological process	inorganic cation transmembrane transport
GO_0060079	Biological process	excitatory postsynaptic potential
GO_1902495	Cellular component	transmembrane transporter complex
GO_0009986	Cellular component	cell surface
GO_0045211	Cellular component	postsynaptic membrane
GO_1904602	Cellular component	serotonin-activated cation-selective channel complex
GO_0045202	Cellular component	synapse
GO_0005886	Cellular component	plasma membrane
GO_0043005	Cellular component	neuron projection
GO_0005231	Molecular function	excitatory extracellular ligand-gated monoatomic ion channel activity
GO_1904315	Molecular function	transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential
GO_0022850	Molecular function	serotonin-gated monoatomic cation channel activity

Gene name	HTR3B
Protein name	5-hydroxytryptamine receptor 3B 5-hydroxytryptamine (Serotonin) receptor 3B 5-hydroxytryptamine receptor 3B (5-HT3-B) (5-HT3B) (Serotonin receptor 3B)
Synonyms
Description	FUNCTION: Forms serotonin (5-hydroxytryptamine/5-HT3)-activated cation-selective channel complexes, which when activated cause fast, depolarizing responses in neurons. .
Accessions	B3VRL0 B3VRN5 H0YFX8 B3VRP5 B3VRL5 ENST00000543092.1 B3VRN0 ENST00000260191.8 [O95264-1] B3VRK5 ENST00000537778.5 [O95264-2] B3VRM0 O95264 B3VRM5 B3VRP0

HTR3B report