Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 8 studies | 62% ± 24% | |
adipocyte | 7 studies | 24% ± 5% | |
GABAergic neuron | 7 studies | 51% ± 27% | |
oligodendrocyte | 7 studies | 25% ± 8% | |
retinal ganglion cell | 6 studies | 60% ± 19% | |
retina horizontal cell | 6 studies | 26% ± 6% | |
amacrine cell | 4 studies | 41% ± 24% | |
astrocyte | 4 studies | 29% ± 10% | |
oligodendrocyte precursor cell | 4 studies | 21% ± 3% | |
interneuron | 4 studies | 59% ± 24% | |
neuron | 3 studies | 38% ± 14% | |
GABAergic interneuron | 3 studies | 39% ± 12% | |
epithelial cell | 3 studies | 25% ± 4% | |
ciliated cell | 3 studies | 33% ± 13% | |
Schwann cell | 3 studies | 44% ± 19% | |
melanocyte | 3 studies | 33% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 4952.24 | 258 / 258 | 99% | 6.42 | 227 / 230 |
brain | 100% | 5801.24 | 2639 / 2642 | 98% | 7.36 | 693 / 705 |
kidney | 100% | 3648.20 | 89 / 89 | 98% | 6.94 | 880 / 901 |
ovary | 100% | 4612.47 | 180 / 180 | 97% | 5.06 | 419 / 430 |
thymus | 99% | 2430.97 | 648 / 653 | 97% | 5.09 | 585 / 605 |
breast | 90% | 2087.39 | 411 / 459 | 96% | 4.60 | 1078 / 1118 |
skin | 89% | 1141.55 | 1617 / 1809 | 96% | 7.06 | 451 / 472 |
prostate | 82% | 1325.50 | 202 / 245 | 97% | 2.67 | 489 / 502 |
uterus | 99% | 2572.35 | 168 / 170 | 62% | 1.65 | 285 / 459 |
intestine | 77% | 1894.18 | 747 / 966 | 80% | 1.78 | 419 / 527 |
bladder | 86% | 1806.48 | 18 / 21 | 63% | 1.34 | 319 / 504 |
esophagus | 69% | 2080.84 | 1002 / 1445 | 78% | 2.15 | 142 / 183 |
lung | 48% | 495.83 | 279 / 578 | 77% | 1.83 | 887 / 1155 |
stomach | 40% | 785.31 | 143 / 359 | 80% | 2.07 | 229 / 286 |
eye | 0% | 0 | 0 / 0 | 100% | 8.99 | 80 / 80 |
adipose | 100% | 3533.54 | 1203 / 1204 | 0% | 0 | 0 / 0 |
pancreas | 7% | 56.81 | 23 / 328 | 93% | 2.32 | 165 / 178 |
blood vessel | 94% | 1588.68 | 1261 / 1335 | 0% | 0 | 0 / 0 |
heart | 89% | 1341.75 | 768 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 79% | 2.74 | 23 / 29 |
spleen | 71% | 783.06 | 170 / 241 | 0% | 0 | 0 / 0 |
muscle | 46% | 425.66 | 367 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 42% | 0.78 | 19 / 45 |
liver | 3% | 21.12 | 6 / 226 | 26% | 0.62 | 106 / 406 |
peripheral blood | 0% | 2.50 | 3 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008150 | Biological process | biological_process |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
GO_0005524 | Molecular function | ATP binding |
Gene name | HSPA12A |
Protein name | Heat shock protein family A (Hsp70) member 12A Heat shock 70 kDa protein 12A |
Synonyms | KIAA0417 |
Description | FUNCTION: Adapter protein for SORL1, but not SORT1. Delays SORL1 internalization and affects SORL1 subcellular localization. . |
Accessions | A0A6I8PII9 ENST00000674267.1 ENST00000674473.1 ENST00000635765.1 O43301 ENST00000674401.1 K7ELE6 A0A6I8PIT5 A0A6I8PL68 ENST00000674197.1 A0A6I8PIU5 A0A6I8PIX2 ENST00000674394.1 ENST00000674344.1 A0A6I8PIW1 A0A6I8PL32 ENST00000674326.1 A0A6I8PLB1 ENST00000674459.1 ENST00000369209.8 ENST00000674347.1 A0A6I8PU93 A0A6I8PLA6 ENST00000674505.1 ENST00000674205.1 A0A1B0GTF3 A0A6I8PRZ9 ENST00000674167.1 ENST00000480802.2 ENST00000674491.1 |