HSDL1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
GABAergic neuron	4 studies	26% ± 8%	Explore
glutamatergic neuron	4 studies	30% ± 11%	Explore
epithelial cell	3 studies	18% ± 3%	Explore
neuron	3 studies	21% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	22% ± 4%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	1596.31	459 / 459	100%	30.05	1118 / 1118
brain	100%	2551.57	2640 / 2642	100%	42.36	705 / 705
prostate	100%	1497.25	245 / 245	100%	19.90	501 / 502
thymus	100%	3238.48	653 / 653	100%	28.18	603 / 605
bladder	100%	1497.14	21 / 21	100%	18.55	502 / 504
uterus	100%	1868.43	170 / 170	99%	22.28	456 / 459
kidney	100%	1092.17	89 / 89	99%	17.76	892 / 901
adrenal gland	100%	2462.71	258 / 258	98%	37.32	226 / 230
skin	100%	1295.87	1805 / 1809	98%	27.96	464 / 472
esophagus	100%	1112.59	1445 / 1445	98%	12.54	179 / 183
lung	100%	1406.30	577 / 578	98%	20.81	1131 / 1155
intestine	100%	1365.32	966 / 966	94%	13.48	496 / 527
pancreas	94%	577.84	309 / 328	99%	14.96	176 / 178
ovary	100%	2483.26	180 / 180	93%	12.49	398 / 430
stomach	99%	848.37	355 / 359	91%	12.33	261 / 286
liver	85%	432.07	192 / 226	78%	8.65	317 / 406
lymph node	0%	0	0 / 0	100%	18.45	29 / 29
spleen	100%	1692.38	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	15.79	45 / 45
ureter	0%	0	0 / 0	100%	25.83	1 / 1
adipose	100%	1292.04	1203 / 1204	0%	0	0 / 0
muscle	100%	1596.44	802 / 803	0%	0	0 / 0
blood vessel	100%	1174.35	1331 / 1335	0%	0	0 / 0
heart	97%	1377.53	836 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	91%	15.00	73 / 80
peripheral blood	63%	443.39	583 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0