HPCAL4 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	6 studies	31% ± 14%	Explore
GABAergic neuron	3 studies	34% ± 4%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	32% ± 9%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	98%	15708.15	2594 / 2642	99%	56.48	696 / 705
adrenal gland	7%	148.22	17 / 258	68%	23.01	157 / 230
thymus	0%	0	0 / 653	72%	13.89	436 / 605
kidney	34%	662.53	30 / 89	10%	0.47	92 / 901
pancreas	27%	383.30	89 / 328	11%	0.27	20 / 178
skin	0%	3.11	3 / 1809	29%	1.16	135 / 472
ovary	14%	202.93	26 / 180	13%	0.46	56 / 430
lung	1%	10.25	4 / 578	23%	1.08	262 / 1155
uterus	0%	0	0 / 170	19%	0.64	87 / 459
lymph node	0%	0	0 / 0	17%	0.25	5 / 29
muscle	15%	220.78	120 / 803	0%	0	0 / 0
esophagus	0%	5.95	6 / 1445	13%	0.35	23 / 183
tonsil	0%	0	0 / 0	11%	0.30	5 / 45
bladder	0%	0	0 / 21	6%	0.22	29 / 504
stomach	0%	2.47	1 / 359	4%	0.20	11 / 286
eye	0%	0	0 / 0	4%	0.31	3 / 80
breast	0%	0	0 / 459	3%	0.11	33 / 1118
prostate	0%	3.58	1 / 245	2%	0.04	12 / 502
intestine	0%	0	0 / 966	3%	0.07	14 / 527
heart	2%	28.72	19 / 861	0%	0	0 / 0
liver	0%	0	0 / 226	1%	0.02	3 / 406
peripheral blood	0%	2.64	2 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
adipose	0%	0	0 / 1204	0%	0	0 / 0
blood vessel	0%	0	0 / 1335	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1