HOXB-AS3 | OmnibusX

Name	Number of supported studies	Average coverage
kidney loop of Henle epithelial cell	4 studies	22% ± 4%	Explore
kidney distal convoluted tubule epithelial cell	3 studies	31% ± 5%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of HOXB-AS3 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	100%	822.19	966 / 966	89%	13.65	468 / 527
stomach	67%	186.63	239 / 359	78%	8.42	223 / 286
kidney	100%	617.04	89 / 89	41%	3.99	373 / 901
lung	100%	178.76	576 / 578	37%	2.92	424 / 1155
adrenal gland	80%	46.06	207 / 258	40%	2.66	93 / 230
uterus	72%	51.94	122 / 170	42%	7.74	191 / 459
spleen	97%	85.48	234 / 241	0%	0	0 / 0
bladder	43%	26.67	9 / 21	44%	5.48	222 / 504
esophagus	39%	71.63	566 / 1445	46%	4.98	85 / 183
pancreas	4%	1.61	14 / 328	73%	4.81	130 / 178
breast	46%	21.79	209 / 459	22%	4.61	243 / 1118
adipose	47%	55.07	569 / 1204	0%	0	0 / 0
ovary	2%	0.90	3 / 180	44%	6.08	190 / 430
skin	27%	14.99	493 / 1809	17%	1.01	82 / 472
prostate	13%	10.58	33 / 245	1%	0.05	6 / 502
blood vessel	12%	9.25	155 / 1335	0%	0	0 / 0
brain	6%	8.64	159 / 2642	2%	0.21	15 / 705
tonsil	0%	0	0 / 0	7%	1.14	3 / 45
thymus	5%	2.78	32 / 653	0%	0	0 / 605
liver	0%	0.16	1 / 226	4%	0.17	16 / 406
peripheral blood	0%	0.20	4 / 929	0%	0	0 / 0
heart	0%	0.03	1 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0043484	Biological process	regulation of RNA splicing
GO_2000632	Biological process	negative regulation of pre-miRNA processing
GO_0008380	Biological process	RNA splicing
GO_0006397	Biological process	mRNA processing
GO_0050821	Biological process	protein stabilization
GO_0005515	Molecular function	protein binding

Gene name	HOXB-AS3
Protein name	HOXB-AS3 peptide
Synonyms
Description	FUNCTION: Blocks the binding of HNRNPA1 to the intronic sequences flanking exon 9 of the PKM gene by competitively binding to the HNRNPA1 RGG-box motif . This inhibits inclusion of exon 9 and promotes inclusion of exon 10, suppressing formation of the PKM M2 isoform and promoting production of the M1 isoform . Also suppresses HNRNPA1-mediated processing of microRNA 18a (miR-18a) . Promotes MYC stability through interaction with IGF2BP2 . .
Accessions	C0HLZ6

HOXB-AS3 report