Insufficient scRNA-seq data for expression of HMGB4 at single-cell level.
Insufficient scRNA-seq data for expression of HMGB4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 57% | 26.02 | 139 / 245 | 0% | 0 | 0 / 502 |
liver | 54% | 4.07 | 122 / 226 | 0% | 0 | 0 / 406 |
bladder | 52% | 2.57 | 11 / 21 | 0% | 0.01 | 2 / 504 |
adrenal gland | 53% | 3.37 | 136 / 258 | 0% | 0 | 0 / 230 |
ovary | 49% | 2.49 | 89 / 180 | 0% | 0 | 0 / 430 |
spleen | 49% | 2.10 | 118 / 241 | 0% | 0 | 0 / 0 |
stomach | 47% | 2.87 | 170 / 359 | 1% | 0.02 | 2 / 286 |
kidney | 47% | 3.79 | 42 / 89 | 0% | 0 | 0 / 901 |
intestine | 46% | 3.67 | 442 / 966 | 0% | 0.00 | 1 / 527 |
uterus | 46% | 2.96 | 78 / 170 | 0% | 0 | 0 / 459 |
esophagus | 45% | 5.26 | 655 / 1445 | 0% | 0 | 0 / 183 |
pancreas | 45% | 2.30 | 146 / 328 | 0% | 0 | 0 / 178 |
brain | 44% | 1.81 | 1154 / 2642 | 0% | 0.01 | 1 / 705 |
thymus | 43% | 8.25 | 284 / 653 | 0% | 0 | 0 / 605 |
breast | 40% | 17.03 | 184 / 459 | 0% | 0.00 | 3 / 1118 |
lung | 37% | 2.68 | 214 / 578 | 1% | 0.01 | 6 / 1155 |
blood vessel | 35% | 2.26 | 466 / 1335 | 0% | 0 | 0 / 0 |
adipose | 35% | 3.53 | 420 / 1204 | 0% | 0 | 0 / 0 |
skin | 34% | 4.00 | 609 / 1809 | 0% | 0 | 0 / 472 |
heart | 33% | 1.68 | 285 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 27% | 1.22 | 252 / 929 | 0% | 0 | 0 / 0 |
muscle | 27% | 5.51 | 214 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005694 | Cellular component | chromosome |
GO_0005634 | Cellular component | nucleus |
GO_0008301 | Molecular function | DNA binding, bending |
GO_0005515 | Molecular function | protein binding |
Gene name | HMGB4 |
Protein name | High-mobility group box 4 High mobility group protein B4 |
Synonyms | |
Description | |
Accessions | ENST00000522796.1 ENST00000519684.5 Q6NSH1 Q8WW32 ENST00000681531.1 |