HMCN2 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of HMCN2 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	100%	11000.68	966 / 966	59%	1.93	310 / 527
prostate	86%	3229.36	210 / 245	66%	1.82	333 / 502
stomach	81%	1217.39	292 / 359	57%	2.30	162 / 286
esophagus	91%	3998.33	1321 / 1445	42%	1.45	76 / 183
uterus	96%	7802.84	164 / 170	23%	2.29	105 / 459
bladder	86%	3069.00	18 / 21	29%	0.76	145 / 504
thymus	89%	1696.87	578 / 653	21%	0.95	130 / 605
lung	76%	1243.16	440 / 578	22%	0.64	252 / 1155
muscle	97%	2457.66	777 / 803	0%	0	0 / 0
heart	87%	1749.67	747 / 861	0%	0	0 / 0
breast	66%	1255.68	304 / 459	19%	0.50	211 / 1118
adipose	75%	3316.79	899 / 1204	0%	0	0 / 0
skin	55%	867.16	1001 / 1809	6%	0.25	30 / 472
blood vessel	56%	3986.04	750 / 1335	0%	0	0 / 0
kidney	30%	330.69	27 / 89	25%	0.59	224 / 901
pancreas	4%	31.91	13 / 328	46%	1.13	81 / 178
ovary	20%	681.96	36 / 180	26%	1.35	110 / 430
liver	10%	83.62	23 / 226	26%	1.14	107 / 406
adrenal gland	8%	87.08	20 / 258	27%	1.33	62 / 230
brain	1%	12.30	37 / 2642	17%	0.67	122 / 705
lymph node	0%	0	0 / 0	17%	0.34	5 / 29
tonsil	0%	0	0 / 0	11%	0.18	5 / 45
spleen	1%	15.16	2 / 241	0%	0	0 / 0
peripheral blood	0%	3.34	4 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0007156	Biological process	homophilic cell adhesion via plasma membrane adhesion molecules
GO_0050808	Biological process	synapse organization
GO_0007411	Biological process	axon guidance
GO_0032154	Cellular component	cleavage furrow
GO_0030424	Cellular component	axon
GO_0005576	Cellular component	extracellular region
GO_0043025	Cellular component	neuronal cell body
GO_0062023	Cellular component	collagen-containing extracellular matrix
GO_0005886	Cellular component	plasma membrane
GO_0005201	Molecular function	extracellular matrix structural constituent
GO_0005509	Molecular function	calcium ion binding
GO_0008046	Molecular function	axon guidance receptor activity

Gene name	HMCN2
Protein name	Hemicentin-2 Hemicentin 2
Synonyms
Description
Accessions	ENST00000683500.2 [Q8NDA2-5] ENST00000487727.6 H0Y3X1 A0A096LPG1 A0A087WY63 ENST00000428715.2 ENST00000624552.4 [Q8NDA2-1] Q8NDA2 ENST00000611173.1

HMCN2 report