HDHD2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
oligodendrocyte	6 studies	23% ± 7%	Explore
astrocyte	4 studies	24% ± 5%	Explore
oligodendrocyte precursor cell	4 studies	30% ± 8%	Explore
retinal ganglion cell	3 studies	59% ± 23%	Explore
retina horizontal cell	3 studies	21% ± 6%	Explore
GABAergic neuron	3 studies	42% ± 10%	Explore
glutamatergic neuron	3 studies	52% ± 12%	Explore
endothelial cell	3 studies	21% ± 2%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	4 studies	39% ± 6%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	2413.08	2642 / 2642	28%	0.39	194 / 705
esophagus	100%	959.97	1444 / 1445	22%	0.34	40 / 183
kidney	100%	1392.06	89 / 89	16%	0.25	142 / 901
lung	99%	923.66	575 / 578	13%	0.25	154 / 1155
bladder	100%	1010.10	21 / 21	11%	0.21	54 / 504
thymus	100%	1337.61	653 / 653	11%	0.14	64 / 605
breast	100%	1019.69	459 / 459	10%	0.20	114 / 1118
intestine	100%	1049.09	966 / 966	8%	0.13	41 / 527
adrenal gland	100%	2146.95	258 / 258	7%	0.09	17 / 230
stomach	100%	908.50	359 / 359	7%	0.14	19 / 286
uterus	100%	1034.52	170 / 170	7%	0.10	30 / 459
skin	99%	860.16	1799 / 1809	7%	0.09	32 / 472
ovary	100%	1167.84	180 / 180	4%	0.07	19 / 430
prostate	100%	1116.57	245 / 245	4%	0.08	21 / 502
pancreas	99%	729.36	326 / 328	3%	0.07	6 / 178
liver	100%	741.08	226 / 226	2%	0.04	10 / 406
spleen	100%	849.74	241 / 241	0%	0	0 / 0
adipose	100%	938.74	1203 / 1204	0%	0	0 / 0
blood vessel	100%	884.19	1332 / 1335	0%	0	0 / 0
muscle	99%	698.92	796 / 803	0%	0	0 / 0
heart	93%	849.96	805 / 861	0%	0	0 / 0
peripheral blood	71%	500.97	659 / 929	0%	0	0 / 0
lymph node	0%	0	0 / 0	3%	0.06	1 / 29
tonsil	0%	0	0 / 0	2%	0.04	1 / 45
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1