HCN3 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of HCN3 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	100%	1080.56	964 / 966	94%	6.35	494 / 527
brain	96%	1511.84	2545 / 2642	97%	9.56	683 / 705
esophagus	98%	684.91	1419 / 1445	95%	6.42	173 / 183
adrenal gland	99%	744.86	256 / 258	92%	9.36	212 / 230
stomach	98%	477.67	353 / 359	90%	6.04	258 / 286
uterus	100%	837.90	170 / 170	88%	6.54	405 / 459
bladder	100%	642.90	21 / 21	88%	5.87	442 / 504
kidney	100%	1336.42	89 / 89	85%	5.25	765 / 901
pancreas	94%	381.13	309 / 328	89%	5.68	158 / 178
breast	97%	496.30	443 / 459	84%	4.46	935 / 1118
skin	95%	1061.77	1719 / 1809	84%	4.90	398 / 472
ovary	99%	832.26	179 / 180	77%	3.91	332 / 430
liver	98%	1731.98	221 / 226	77%	4.73	314 / 406
lung	93%	356.36	537 / 578	78%	4.33	896 / 1155
prostate	100%	807.81	244 / 245	60%	2.01	301 / 502
thymus	100%	907.60	653 / 653	58%	1.96	349 / 605
spleen	98%	363.19	236 / 241	0%	0	0 / 0
blood vessel	89%	312.25	1194 / 1335	0%	0	0 / 0
adipose	88%	383.73	1056 / 1204	0%	0	0 / 0
tonsil	0%	0	0 / 0	80%	4.63	36 / 45
heart	54%	138.26	468 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	39%	1.12	31 / 80
lymph node	0%	0	0 / 0	38%	1.24	11 / 29
peripheral blood	22%	97.65	207 / 929	0%	0	0 / 0
muscle	17%	37.23	135 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_1903351	Biological process	cellular response to dopamine
GO_0071320	Biological process	cellular response to cAMP
GO_0035725	Biological process	sodium ion transmembrane transport
GO_0042391	Biological process	regulation of membrane potential
GO_0071805	Biological process	potassium ion transmembrane transport
GO_0003254	Biological process	regulation of membrane depolarization
GO_0030424	Cellular component	axon
GO_0098855	Cellular component	HCN channel complex
GO_0043025	Cellular component	neuronal cell body
GO_0005886	Cellular component	plasma membrane
GO_0044316	Cellular component	cone cell pedicle
GO_0030425	Cellular component	dendrite
GO_0005248	Molecular function	voltage-gated sodium channel activity
GO_0030552	Molecular function	cAMP binding
GO_0005249	Molecular function	voltage-gated potassium channel activity
GO_0005515	Molecular function	protein binding

Gene name	HCN3
Protein name	Hyperpolarization activated cyclic nucleotide-gated potassium channel Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 HCN3 protein
Synonyms	KIAA1535
Description	FUNCTION: Hyperpolarization-activated potassium channel. May also facilitate the permeation of sodium ions. .
Accessions	ENST00000368358.4 Q86WJ5 Q2T9L6 Q9P1Z3 ENST00000575670.1

HCN3 report