Insufficient scRNA-seq data for expression of GTSF1 at single-cell level.
Insufficient scRNA-seq data for expression of GTSF1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 90% | 34.30 | 523 / 578 | 39% | 7.31 | 445 / 1155 |
bladder | 95% | 53.10 | 20 / 21 | 27% | 7.36 | 134 / 504 |
intestine | 92% | 38.84 | 889 / 966 | 12% | 2.70 | 61 / 527 |
spleen | 100% | 133.21 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.23 | 1 / 1 |
peripheral blood | 96% | 176.24 | 890 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 60.92 | 26 / 29 |
stomach | 51% | 11.02 | 182 / 359 | 31% | 6.78 | 90 / 286 |
esophagus | 51% | 12.53 | 744 / 1445 | 30% | 12.49 | 55 / 183 |
breast | 58% | 17.75 | 265 / 459 | 17% | 1.51 | 189 / 1118 |
brain | 60% | 16.37 | 1581 / 2642 | 15% | 0.65 | 103 / 705 |
prostate | 67% | 24.06 | 164 / 245 | 4% | 0.54 | 21 / 502 |
ovary | 32% | 11.24 | 57 / 180 | 38% | 10.95 | 162 / 430 |
adipose | 67% | 18.11 | 808 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 66% | 18.55 | 875 / 1335 | 0% | 0 | 0 / 0 |
liver | 33% | 9.55 | 75 / 226 | 27% | 7.34 | 108 / 406 |
thymus | 40% | 17.32 | 262 / 653 | 19% | 1.09 | 115 / 605 |
adrenal gland | 53% | 11.14 | 137 / 258 | 4% | 0.60 | 9 / 230 |
skin | 23% | 7.82 | 415 / 1809 | 32% | 8.33 | 149 / 472 |
uterus | 37% | 7.95 | 63 / 170 | 17% | 3.25 | 77 / 459 |
kidney | 36% | 13.84 | 32 / 89 | 11% | 0.30 | 103 / 901 |
tonsil | 0% | 0 | 0 / 0 | 36% | 1.84 | 16 / 45 |
pancreas | 16% | 5.22 | 51 / 328 | 12% | 1.57 | 22 / 178 |
heart | 21% | 8.56 | 180 / 861 | 0% | 0 | 0 / 0 |
muscle | 16% | 8.52 | 132 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 4% | 0.49 | 3 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007283 | Biological process | spermatogenesis |
GO_0030154 | Biological process | cell differentiation |
GO_0005737 | Cellular component | cytoplasm |
GO_0000049 | Molecular function | tRNA binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | GTSF1 |
Protein name | Family with sequence similarity 112, member B, isoform CRA_b (Gametocyte specific factor 1) Gametocyte-specific factor 1 (Protein FAM112B) |
Synonyms | FAM112B hCG_1782630 |
Description | FUNCTION: Required for spermatogenesis and is involved in the suppression of retrotransposon transcription in male germ cells. . |
Accessions | Q8WW33 G3V1V4 ENST00000546931.5 ENST00000305879.8 ENST00000552397.5 |