Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 27% ± 8% | |
ciliated cell | 3 studies | 22% ± 1% | |
glutamatergic neuron | 3 studies | 22% ± 4% | |
dendritic cell | 3 studies | 28% ± 7% |
Insufficient scRNA-seq data for expression of GPN1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1867.54 | 459 / 459 | 100% | 35.25 | 1118 / 1118 |
esophagus | 100% | 1585.94 | 1445 / 1445 | 100% | 29.29 | 183 / 183 |
lung | 100% | 1520.32 | 578 / 578 | 100% | 39.32 | 1155 / 1155 |
ovary | 100% | 1469.29 | 180 / 180 | 100% | 35.91 | 430 / 430 |
stomach | 100% | 1366.93 | 359 / 359 | 100% | 28.80 | 286 / 286 |
intestine | 100% | 1641.78 | 966 / 966 | 100% | 32.87 | 526 / 527 |
uterus | 100% | 1592.29 | 170 / 170 | 100% | 38.47 | 458 / 459 |
pancreas | 100% | 1092.54 | 327 / 328 | 100% | 26.73 | 178 / 178 |
thymus | 100% | 1567.50 | 653 / 653 | 100% | 27.80 | 603 / 605 |
bladder | 100% | 1657.14 | 21 / 21 | 100% | 34.96 | 502 / 504 |
prostate | 100% | 1431.58 | 245 / 245 | 100% | 24.58 | 500 / 502 |
skin | 100% | 2189.70 | 1809 / 1809 | 100% | 30.87 | 470 / 472 |
brain | 99% | 1272.12 | 2628 / 2642 | 100% | 31.28 | 705 / 705 |
kidney | 100% | 1596.01 | 89 / 89 | 99% | 25.82 | 895 / 901 |
liver | 100% | 759.85 | 225 / 226 | 99% | 16.81 | 403 / 406 |
adrenal gland | 100% | 1785.77 | 258 / 258 | 96% | 19.81 | 220 / 230 |
adipose | 100% | 1859.96 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 35.15 | 29 / 29 |
spleen | 100% | 1787.23 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 34.86 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.50 | 1 / 1 |
blood vessel | 100% | 1525.93 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1546.64 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 1069.22 | 842 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 21.25 | 77 / 80 |
peripheral blood | 96% | 1329.36 | 889 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005739 | Cellular component | mitochondrion |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005525 | Molecular function | GTP binding |
GO_0005515 | Molecular function | protein binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0003924 | Molecular function | GTPase activity |
Gene name | GPN1 |
Protein name | GPN-loop GTPase 1 (EC 3.6.5.-) (MBD2-interacting protein) (MBDin) (RNAPII-associated protein 4) (XPA-binding protein 1) GPN-loop GTPase (EC 3.6.5.-) |
Synonyms | MBDIN RPAP4 HUSSY-23 XAB1 |
Description | FUNCTION: Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII) . May act at an RNAP assembly step prior to nuclear import . Forms an interface between the RNA polymerase II enzyme and chaperone/scaffolding proteins, suggesting that it is required to connect RNA polymerase II to regulators of protein complex formation . May be involved in nuclear localization of XPA . . FUNCTION: Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. . |
Accessions | Q9HCN4 ENST00000424214.5 [Q9HCN4-2] ENST00000610189.2 [Q9HCN4-1] ENST00000616939.4 [Q9HCN4-5] F8WD09 ENST00000264718.7 [Q9HCN4-5] ENST00000436280.5 ENST00000407583.7 [Q9HCN4-4] ENST00000503738.5 [Q9HCN4-3] ENST00000515877.5 [Q9HCN4-2] ENST00000458167.6 [Q9HCN4-3] |