GPA33 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
enterocyte	7 studies	27% ± 10%	Explore
goblet cell	6 studies	30% ± 7%	Explore
epithelial cell	4 studies	37% ± 12%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
intestine	3 studies	22% ± 8%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	79%	8266.86	759 / 966	93%	214.47	489 / 527
lung	94%	182.83	546 / 578	23%	7.65	263 / 1155
stomach	25%	11.92	91 / 359	84%	131.70	239 / 286
spleen	97%	93.69	234 / 241	0%	0	0 / 0
peripheral blood	84%	127.34	776 / 929	0%	0	0 / 0
pancreas	1%	0.22	4 / 328	61%	9.24	108 / 178
heart	56%	35.02	483 / 861	0%	0	0 / 0
esophagus	7%	5.85	105 / 1445	40%	28.32	74 / 183
bladder	5%	5.52	1 / 21	27%	62.01	138 / 504
brain	29%	8.16	758 / 2642	1%	0.02	6 / 705
adipose	28%	9.97	339 / 1204	0%	0	0 / 0
muscle	28%	11.88	223 / 803	0%	0	0 / 0
prostate	18%	7.08	44 / 245	0%	0.01	1 / 502
breast	15%	48.18	69 / 459	2%	0.07	25 / 1118
thymus	10%	7.23	68 / 653	7%	0.22	40 / 605
uterus	5%	2.94	8 / 170	11%	2.93	49 / 459
lymph node	0%	0	0 / 0	14%	0.48	4 / 29
adrenal gland	10%	2.38	27 / 258	0%	0	0 / 230
kidney	9%	5.01	8 / 89	1%	0.05	6 / 901
blood vessel	7%	2.53	92 / 1335	0%	0	0 / 0
ovary	4%	1.38	8 / 180	1%	0.21	5 / 430
skin	3%	0.82	51 / 1809	2%	0.08	11 / 472
tonsil	0%	0	0 / 0	4%	0.16	2 / 45
liver	3%	0.68	7 / 226	1%	0.04	3 / 406
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1