Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 13 studies | 24% ± 6% | |
conventional dendritic cell | 7 studies | 25% ± 11% | |
endothelial cell | 7 studies | 21% ± 5% | |
microglial cell | 7 studies | 25% ± 8% | |
epithelial cell | 7 studies | 32% ± 13% | |
classical monocyte | 5 studies | 27% ± 8% | |
myeloid cell | 5 studies | 23% ± 4% | |
dendritic cell | 5 studies | 30% ± 13% | |
GABAergic neuron | 5 studies | 41% ± 19% | |
astrocyte | 5 studies | 35% ± 9% | |
monocyte | 5 studies | 22% ± 4% | |
alveolar macrophage | 5 studies | 22% ± 8% | |
fibroblast | 4 studies | 20% ± 4% | |
oligodendrocyte precursor cell | 4 studies | 25% ± 7% | |
interneuron | 4 studies | 37% ± 21% | |
non-classical monocyte | 3 studies | 26% ± 6% | |
ciliated cell | 3 studies | 23% ± 2% | |
glutamatergic neuron | 3 studies | 65% ± 6% | |
abnormal cell | 3 studies | 22% ± 5% | |
basal cell | 3 studies | 26% ± 5% | |
transit amplifying cell | 3 studies | 22% ± 8% | |
oligodendrocyte | 3 studies | 21% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 2941.90 | 578 / 578 | 100% | 56.79 | 1155 / 1155 |
ovary | 100% | 2291.25 | 180 / 180 | 100% | 66.19 | 430 / 430 |
stomach | 100% | 2532.22 | 359 / 359 | 100% | 77.69 | 286 / 286 |
esophagus | 100% | 1602.80 | 1444 / 1445 | 100% | 48.70 | 183 / 183 |
breast | 100% | 2063.10 | 459 / 459 | 100% | 65.71 | 1114 / 1118 |
intestine | 100% | 2588.60 | 966 / 966 | 100% | 78.18 | 525 / 527 |
liver | 100% | 1942.97 | 226 / 226 | 100% | 50.36 | 404 / 406 |
thymus | 100% | 3502.84 | 653 / 653 | 99% | 83.34 | 601 / 605 |
bladder | 100% | 2394.33 | 21 / 21 | 99% | 65.31 | 500 / 504 |
skin | 100% | 2872.85 | 1809 / 1809 | 99% | 59.40 | 468 / 472 |
pancreas | 100% | 1774.68 | 327 / 328 | 99% | 55.02 | 177 / 178 |
uterus | 100% | 2218.95 | 170 / 170 | 99% | 51.81 | 454 / 459 |
prostate | 100% | 1916.41 | 245 / 245 | 99% | 55.25 | 496 / 502 |
kidney | 100% | 3366.51 | 89 / 89 | 98% | 62.95 | 886 / 901 |
brain | 97% | 994.58 | 2557 / 2642 | 99% | 34.94 | 700 / 705 |
adrenal gland | 100% | 4124.55 | 258 / 258 | 91% | 40.49 | 210 / 230 |
adipose | 100% | 2215.96 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 57.26 | 29 / 29 |
spleen | 100% | 2729.55 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 39.41 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.43 | 1 / 1 |
blood vessel | 100% | 1911.26 | 1332 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 39.63 | 79 / 80 |
peripheral blood | 98% | 2102.80 | 914 / 929 | 0% | 0 | 0 / 0 |
heart | 95% | 1111.35 | 818 / 861 | 0% | 0 | 0 / 0 |
muscle | 81% | 475.24 | 652 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1904016 | Biological process | response to Thyroglobulin triiodothyronine |
GO_0005975 | Biological process | carbohydrate metabolic process |
GO_0051413 | Biological process | response to cortisone |
GO_0019388 | Biological process | galactose catabolic process |
GO_0046479 | Biological process | glycosphingolipid catabolic process |
GO_0030200 | Biological process | heparan sulfate proteoglycan catabolic process |
GO_0042340 | Biological process | keratan sulfate catabolic process |
GO_0035578 | Cellular component | azurophil granule lumen |
GO_0005576 | Cellular component | extracellular region |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005773 | Cellular component | vacuole |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005794 | Cellular component | Golgi apparatus |
GO_1904813 | Cellular component | ficolin-1-rich granule lumen |
GO_0005737 | Cellular component | cytoplasm |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0043202 | Cellular component | lysosomal lumen |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0016936 | Molecular function | galactoside binding |
GO_0004565 | Molecular function | beta-galactosidase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | GLB1 |
Protein name | Beta-galactosidase (EC 3.2.1.23) (Acid beta-galactosidase) (Lactase) (Elastin receptor 1) Galactosidase beta 1 (EC 3.2.1.23) Galactosidase beta 1 Beta-galactosidase (EC 3.2.1.23) (Acid beta-galactosidase) |
Synonyms | ELNR1 |
Description | FUNCTION: [Isoform 1]: Cleaves beta-linked terminal galactosyl residues from gangliosides, glycoproteins, and glycosaminoglycans. .; FUNCTION: [Isoform 2]: Has no beta-galactosidase catalytic activity, but plays functional roles in the formation of extracellular elastic fibers (elastogenesis) and in the development of connective tissue. Seems to be identical to the elastin-binding protein (EBP), a major component of the non-integrin cell surface receptor expressed on fibroblasts, smooth muscle cells, chondroblasts, leukocytes, and certain cancer cell types. In elastin producing cells, associates with tropoelastin intracellularly and functions as a recycling molecular chaperone which facilitates the secretions of tropoelastin and its assembly into elastic fibers. . |
Accessions | ENST00000415454.1 F4YK10 ENST00000399402.7 ENST00000438227.1 ENST00000436768.1 ENST00000440656.1 F8WEN1 ENST00000450835.1 ENST00000446732.5 ENST00000307363.10 C9JF15 C9J4G9 E7EQ29 ENST00000307377.12 P16278 C9J539 C9JWX1 F8WF40 |