Insufficient scRNA-seq data for expression of GHDC at single-cell level.
Insufficient scRNA-seq data for expression of GHDC at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 1701.48 | 328 / 328 | 100% | 38.17 | 178 / 178 |
kidney | 100% | 2519.91 | 89 / 89 | 100% | 64.17 | 897 / 901 |
skin | 100% | 1132.36 | 1807 / 1809 | 100% | 49.09 | 470 / 472 |
stomach | 100% | 1744.25 | 359 / 359 | 99% | 36.91 | 284 / 286 |
intestine | 100% | 1874.54 | 966 / 966 | 99% | 38.85 | 522 / 527 |
thymus | 100% | 3433.29 | 653 / 653 | 99% | 65.08 | 599 / 605 |
brain | 99% | 1323.10 | 2627 / 2642 | 100% | 33.86 | 702 / 705 |
prostate | 100% | 2594.42 | 245 / 245 | 99% | 59.74 | 497 / 502 |
adrenal gland | 100% | 3674.91 | 258 / 258 | 98% | 49.43 | 226 / 230 |
ovary | 100% | 2591.66 | 180 / 180 | 97% | 20.13 | 419 / 430 |
liver | 100% | 1130.61 | 226 / 226 | 97% | 28.15 | 395 / 406 |
bladder | 100% | 1840.90 | 21 / 21 | 97% | 31.67 | 490 / 504 |
lung | 100% | 1988.51 | 578 / 578 | 97% | 26.42 | 1118 / 1155 |
uterus | 100% | 2025.04 | 170 / 170 | 97% | 24.35 | 443 / 459 |
breast | 100% | 1968.10 | 459 / 459 | 96% | 35.29 | 1074 / 1118 |
esophagus | 100% | 1316.06 | 1440 / 1445 | 93% | 20.71 | 170 / 183 |
adipose | 100% | 1844.40 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 75.50 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 42.31 | 29 / 29 |
spleen | 100% | 3897.19 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 21.06 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 18.62 | 1 / 1 |
blood vessel | 100% | 1765.59 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 858.32 | 847 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 1419.90 | 904 / 929 | 0% | 0 | 0 / 0 |
muscle | 87% | 505.01 | 699 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008150 | Biological process | biological_process |
GO_0034774 | Cellular component | secretory granule lumen |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005576 | Cellular component | extracellular region |
GO_0035580 | Cellular component | specific granule lumen |
GO_0005635 | Cellular component | nuclear envelope |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0016881 | Molecular function | acid-amino acid ligase activity |
GO_0003674 | Molecular function | molecular_function |
Gene name | GHDC |
Protein name | GH3 domain-containing protein GH3 domain containing GH3 domain containing (Homolog of mouse LGP1, isoform CRA_b) |
Synonyms | D11LGP1E LGP1 hCG_16580 |
Description | |
Accessions | ENST00000590249.5 K7EL54 Q8N2G8 K7EJT7 ENST00000588762.5 K7ESN3 ENST00000587427.6 [Q8N2G8-1] ENST00000588352.5 ENST00000593209.5 ENST00000414034.7 [Q8N2G8-2] ENST00000301671.12 [Q8N2G8-1] K7EQ41 |