GDPD3 | OmnibusX

Name	Number of supported studies	Average coverage
squamous epithelial cell	4 studies	29% ± 11%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of GDPD3 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	99%	902.34	958 / 966	96%	13.57	505 / 527
uterus	100%	981.39	170 / 170	95%	15.67	434 / 459
bladder	100%	524.00	21 / 21	94%	36.18	474 / 504
stomach	95%	468.01	341 / 359	92%	10.22	264 / 286
esophagus	97%	1231.01	1405 / 1445	87%	9.24	160 / 183
ovary	97%	694.59	175 / 180	86%	6.54	371 / 430
lung	98%	651.01	566 / 578	84%	7.41	974 / 1155
breast	100%	560.83	458 / 459	80%	11.35	892 / 1118
kidney	100%	582.79	89 / 89	65%	4.28	585 / 901
thymus	99%	521.81	645 / 653	57%	2.50	342 / 605
brain	68%	242.36	1808 / 2642	85%	4.16	596 / 705
prostate	99%	676.74	243 / 245	53%	2.11	265 / 502
adrenal gland	83%	207.91	213 / 258	56%	2.34	128 / 230
skin	91%	538.89	1648 / 1809	47%	2.34	221 / 472
pancreas	23%	48.55	75 / 328	96%	16.26	171 / 178
spleen	100%	955.72	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	13.32	1 / 1
adipose	99%	686.21	1193 / 1204	0%	0	0 / 0
blood vessel	96%	397.92	1281 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	93%	4.99	27 / 29
tonsil	0%	0	0 / 0	89%	8.57	40 / 45
peripheral blood	89%	502.78	823 / 929	0%	0	0 / 0
heart	82%	269.35	709 / 861	0%	0	0 / 0
liver	45%	82.84	101 / 226	26%	1.57	105 / 406
muscle	46%	87.10	368 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	9%	0.23	7 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0034638	Biological process	phosphatidylcholine catabolic process
GO_0070291	Biological process	N-acylethanolamine metabolic process
GO_0046475	Biological process	glycerophospholipid catabolic process
GO_0070062	Cellular component	extracellular exosome
GO_0005783	Cellular component	endoplasmic reticulum
GO_0048471	Cellular component	perinuclear region of cytoplasm
GO_0005789	Cellular component	endoplasmic reticulum membrane
GO_0004622	Molecular function	lysophospholipase activity
GO_0046872	Molecular function	metal ion binding
GO_0008081	Molecular function	phosphoric diester hydrolase activity

Gene name	GDPD3
Protein name	Lysophospholipase D GDPD3 (EC 3.1.4.-) (Glycerophosphodiester phosphodiesterase 7) (Glycerophosphodiester phosphodiesterase domain-containing protein 3) Glycerophosphodiester phosphodiesterase domain containing 3
Synonyms	GDE7
Description	FUNCTION: Hydrolyzes lysoglycerophospholipids to produce lysophosphatidic acid (LPA) and the corresponding amines . Shows a preference for 1-O-alkyl-sn-glycero-3-phosphocholine (lyso-PAF), lysophosphatidylcholine (lyso-PC) and N-acylethanolamine lysophospholipids . Does not display glycerophosphodiester phosphodiesterase activity, since it cannot hydrolyze either glycerophosphoinositol or glycerophosphocholine. .
Accessions	Q7L5L3 ENST00000566613.1 H3BPX3 ENST00000406256.8 [Q7L5L3-2] ENST00000566434.5 H3BMN9

GDPD3 report