GDAP2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
microglial cell	6 studies	21% ± 6%	Explore
endothelial cell	5 studies	23% ± 7%	Explore
epithelial cell	5 studies	23% ± 6%	Explore
macrophage	5 studies	26% ± 4%	Explore
astrocyte	4 studies	28% ± 7%	Explore
classical monocyte	3 studies	16% ± 1%	Explore
GABAergic neuron	3 studies	45% ± 7%	Explore
glutamatergic neuron	3 studies	55% ± 5%	Explore
oligodendrocyte precursor cell	3 studies	25% ± 7%	Explore
oligodendrocyte	3 studies	21% ± 4%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	34% ± 12%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	762.93	1445 / 1445	100%	8.92	183 / 183
lung	100%	1065.88	578 / 578	100%	6.89	1155 / 1155
ovary	100%	748.36	180 / 180	100%	6.02	430 / 430
breast	100%	911.96	459 / 459	100%	8.02	1117 / 1118
bladder	100%	877.90	21 / 21	100%	6.17	503 / 504
prostate	100%	906.73	245 / 245	100%	5.69	501 / 502
uterus	100%	854.00	170 / 170	100%	5.76	458 / 459
thymus	100%	1024.09	653 / 653	100%	5.78	603 / 605
stomach	100%	740.06	359 / 359	100%	6.74	285 / 286
intestine	100%	865.83	966 / 966	100%	5.31	525 / 527
skin	100%	806.96	1808 / 1809	99%	6.05	468 / 472
pancreas	100%	672.53	328 / 328	99%	5.40	176 / 178
kidney	100%	800.70	89 / 89	99%	4.37	889 / 901
brain	99%	392.47	2612 / 2642	100%	3.52	703 / 705
liver	100%	652.43	226 / 226	96%	3.19	389 / 406
adrenal gland	100%	729.52	258 / 258	95%	2.89	218 / 230
adipose	100%	921.24	1204 / 1204	0%	0	0 / 0
blood vessel	100%	790.01	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	3.97	29 / 29
spleen	100%	1039.20	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	5.45	45 / 45
ureter	0%	0	0 / 0	100%	2.85	1 / 1
peripheral blood	99%	808.99	916 / 929	0%	0	0 / 0
heart	97%	447.84	838 / 861	0%	0	0 / 0
muscle	96%	266.52	769 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	89%	2.56	71 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0