Insufficient scRNA-seq data for expression of GALNT4 at single-cell level.
Insufficient scRNA-seq data for expression of GALNT4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
intestine | 100% | 1350.78 | 966 / 966 | 19% | 0.32 | 101 / 527 |
stomach | 100% | 1441.80 | 359 / 359 | 11% | 0.20 | 31 / 286 |
bladder | 100% | 484.67 | 21 / 21 | 7% | 0.12 | 35 / 504 |
pancreas | 100% | 590.93 | 327 / 328 | 6% | 0.09 | 11 / 178 |
esophagus | 100% | 473.41 | 1444 / 1445 | 2% | 0.02 | 3 / 183 |
lung | 100% | 612.68 | 576 / 578 | 2% | 0.03 | 21 / 1155 |
uterus | 99% | 534.70 | 169 / 170 | 1% | 0.03 | 6 / 459 |
liver | 100% | 401.94 | 226 / 226 | 0% | 0.01 | 2 / 406 |
adipose | 100% | 551.75 | 1204 / 1204 | 0% | 0 | 0 / 0 |
adrenal gland | 100% | 379.34 | 258 / 258 | 0% | 0 | 0 / 230 |
breast | 100% | 486.34 | 459 / 459 | 0% | 0 | 0 / 1118 |
kidney | 100% | 514.89 | 89 / 89 | 0% | 0 | 0 / 901 |
ovary | 100% | 392.77 | 180 / 180 | 0% | 0 | 0 / 430 |
prostate | 100% | 542.60 | 245 / 245 | 0% | 0 | 0 / 502 |
spleen | 100% | 986.03 | 241 / 241 | 0% | 0 | 0 / 0 |
thymus | 100% | 474.66 | 653 / 653 | 0% | 0 | 0 / 605 |
blood vessel | 100% | 474.51 | 1331 / 1335 | 0% | 0 | 0 / 0 |
skin | 99% | 489.18 | 1789 / 1809 | 0% | 0 | 0 / 472 |
heart | 97% | 307.75 | 836 / 861 | 0% | 0 | 0 / 0 |
brain | 93% | 216.19 | 2464 / 2642 | 0% | 0 | 0 / 705 |
peripheral blood | 87% | 542.93 | 809 / 929 | 0% | 0 | 0 / 0 |
muscle | 32% | 41.16 | 255 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0016266 | Biological process | O-glycan processing |
GO_0018243 | Biological process | protein O-linked glycosylation via threonine |
GO_0006493 | Biological process | protein O-linked glycosylation |
GO_0018242 | Biological process | protein O-linked glycosylation via serine |
GO_0000139 | Cellular component | Golgi membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0030145 | Molecular function | manganese ion binding |
GO_0004653 | Molecular function | polypeptide N-acetylgalactosaminyltransferase activity |
GO_0030246 | Molecular function | carbohydrate binding |
GO_0005515 | Molecular function | protein binding |
Gene name | GALNT4 |
Protein name | Polypeptide N-acetylgalactosaminyltransferase 4 (EC 2.4.1.41) (Polypeptide GalNAc transferase 4) (GalNAc-T4) (pp-GaNTase 4) (Protein-UDP acetylgalactosaminyltransferase 4) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 4) Alternative protein GALNT4 |
Synonyms | |
Description | FUNCTION: Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a highest activity toward Muc7, EA2 and Muc2, with a lowest activity than GALNT2. Glycosylates 'Thr-57' of SELPLG. . |
Accessions | ENST00000529983.3 [Q8N4A0-1] L8EA58 Q8N4A0 |