Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 7 studies | 22% ± 6% | |
astrocyte | 6 studies | 27% ± 9% | |
epithelial cell | 5 studies | 24% ± 6% | |
endothelial cell | 4 studies | 23% ± 5% | |
ciliated cell | 4 studies | 17% ± 1% | |
fibroblast | 4 studies | 23% ± 4% | |
adipocyte | 4 studies | 29% ± 3% | |
GABAergic neuron | 3 studies | 41% ± 3% | |
glutamatergic neuron | 3 studies | 39% ± 5% | |
lymphocyte | 3 studies | 18% ± 4% | |
interneuron | 3 studies | 33% ± 13% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 32% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2001.68 | 1445 / 1445 | 100% | 9.58 | 183 / 183 |
prostate | 100% | 2273.76 | 245 / 245 | 100% | 7.91 | 502 / 502 |
breast | 100% | 1847.93 | 459 / 459 | 100% | 11.33 | 1117 / 1118 |
thymus | 100% | 2456.08 | 653 / 653 | 100% | 7.92 | 602 / 605 |
intestine | 100% | 2042.42 | 966 / 966 | 99% | 7.88 | 523 / 527 |
stomach | 100% | 1455.09 | 358 / 359 | 99% | 8.22 | 284 / 286 |
uterus | 100% | 2445.45 | 170 / 170 | 99% | 9.28 | 453 / 459 |
bladder | 100% | 2125.48 | 21 / 21 | 98% | 7.37 | 496 / 504 |
pancreas | 99% | 912.79 | 326 / 328 | 99% | 7.78 | 176 / 178 |
brain | 100% | 1403.72 | 2629 / 2642 | 99% | 6.10 | 695 / 705 |
ovary | 100% | 3726.16 | 180 / 180 | 97% | 6.51 | 415 / 430 |
lung | 99% | 1598.04 | 575 / 578 | 97% | 7.50 | 1120 / 1155 |
adrenal gland | 100% | 1774.47 | 258 / 258 | 95% | 5.35 | 218 / 230 |
kidney | 99% | 1564.87 | 88 / 89 | 95% | 5.93 | 856 / 901 |
skin | 100% | 2021.75 | 1808 / 1809 | 86% | 4.83 | 407 / 472 |
liver | 96% | 789.05 | 218 / 226 | 80% | 4.07 | 325 / 406 |
blood vessel | 100% | 2140.49 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 7.68 | 29 / 29 |
spleen | 100% | 2146.56 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.13 | 1 / 1 |
adipose | 100% | 1933.49 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 99% | 1367.48 | 854 / 861 | 0% | 0 | 0 / 0 |
muscle | 97% | 939.22 | 778 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 8.85 | 43 / 45 |
eye | 0% | 0 | 0 / 0 | 71% | 3.25 | 57 / 80 |
peripheral blood | 64% | 603.23 | 594 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0000976 | Molecular function | transcription cis-regulatory region binding |
Gene name | GABPB2 |
Protein name | GA-binding protein subunit beta-2 (GABP subunit beta-2) (GABPB-2) GA binding protein transcription factor subunit beta 2 |
Synonyms | |
Description | FUNCTION: May function as transcription factor capable of interacting with purine rich repeats (GA repeats). . |
Accessions | Q8TAK5 ENST00000368918.8 Q5SZG2 ENST00000368916.1 |